Trichechus manatus latirostris (Florida manatee): 101353341
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Entry
101353341 CDS
T05135
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101353341
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101353341
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101353341
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101353341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_3
RET_CLD1
V_ATPase_I
RCR
EphA2_TM
7tm_3
Baculo_11_kDa
MAP17
DUF6249
Big_9
Motif
Other DBs
NCBI-GeneID:
101353341
NCBI-ProteinID:
XP_004386283
UniProt:
A0A2Y9E3C6
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGGSYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADVGSNAEIQYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPVFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPFSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPASTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFITVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQHKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRYDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRHVTFH
LPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQVSPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLV
NGHTLTRAWKEDSNKNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQSGGAIESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattct
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggagatcttcacaacctccaatagaatagacagagaaaaactctgtgctgga
ggctcatatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtgaaggataccaatgacaatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtgcagcattatgaa
ctgttaaatgggcagagtgtttttggactggatatcgtggaaacgccggagggagagaag
tggccgcaattaattgttcagcaaaacttggatagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggtactccacagaaatccagcacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccggtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcccgtaggcacctctgtgattcagctccatgccactgatgcggat
gtaggcagtaatgcagaaatccagtacatttttggtgcccaggttgcccctgcaaccaaa
cgactctttgctttaaataatactaccgggttgatcacagttcagaggtccttagatcga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccacacctgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcccaacatagacctc
aggtacattataagtcccatcaacggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgtttcattgaaagagaggtcccgtttcatctaaaggcagtttacgacaaccagtatttg
ttagagacctcttcgttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccagttttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttaccagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgcttcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcagctgtgatagtg
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggggaaaataaagccgtgactctttccattctaaatgacaatgagaattttgtgttg
gatcccttctctggagtcataaagtcaaatgtttcatttgacagagagcagcagagctcc
tacacttttgatgtcaaagccacagatggaggacaaccaccccgttcctccactgccaaa
gtaactatcaatgtcatggatgtcaatgacaatagccccgttgtcatttctccaccgtct
aacacttcctttaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt
tttgcagtggatattgacacaggaatgaacgctgaacttaagtatacgattgtgagtggg
aacaacaaaggtttgtttcggatcgatccagtaacaggtaacattactctggaagaaaaa
ccagcatctactgatgtgggcttgcaccgtttggtggtcaacataagtgacctggggtat
ccaaagtctttgcacacactcgtgctggtttttctgtatgtgaatgacactgctggcaat
gcctcctacatctatgacttgatccgcaggactatggagacccccttggacaggaacata
ggggatagcagccaaccgtatcaaaacgaggactatctcaccatcatgatcgccatcgtg
gcaggcgccatggtggtcatcgttgtgatcttcatcaccgttctggtgcgctgtcgccat
gcatccaggttcaaagcagctcagagaagcaagcaaggcgccgagtggatgtccccaaac
caggagaacaaacaacacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgtcactatcgaagagtccaagccggatgatgcagttcacgaacctatc
aatgggacaataagcctgccagctgagctggaggagcaaagcataggaagatatgactgg
ggtcctgcccctccgacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcctctccacagcctgcttttcatctcaaaccagacactccagtttccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacacgctt
tccaaacgctcttccactagttcagaccacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcgcagaggcacgttacgtttcac
ctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccacgagccggtg
ggtagtggaaccctgatctcacaccctcttcctctggttcagccacaggacgaattctat
gaccaggtctctccggacaagaggaccgaagcagatggaaactctgaccccaactctgat
gggcctctgggtccccgaggattagctgaagctacagagatgtgcactcaagagtgcttg
gttttgggtcactctgataattgttggatgcctcctggcttgggcccatatcaacaccct
aaatctcctctctcaacctttgcaccccagaaagaatgggtcaagaaggacaagctagtg
aatgggcacactctgactagagcctggaaagaagacagcaacaagaaccagttcaatgac
cgtaagcagtatggttccaatgaaggccatttcaacaatggcagccacatgacagacatt
cctctggcaaatctgaagtcttataagcaatcaggaggcgcaattgagagtcctaaagag
caccaactctaa
DBGET
integrated database retrieval system
