Trichechus manatus latirostris (Florida manatee): 101355974
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Entry
101355974 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-B5-like
KO
K16496
protocadherin gamma subfamily B
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101355974
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101355974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
101355974
NCBI-ProteinID:
XP_012412341
UniProt:
A0A2Y9G0P6
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MGSGAGEWGWAERRRVLFPFLLSLFCPALSEQIRYRIPEEMSKGSVVGNLAKDLGLSVHE
LPTRKLRVSSEKPYFAVSSESGELLVSSRLDREQICGKKPVCALEFEAVAENPLNFYHVN
VEIEDVNDHTPKFTQTAFELQISESAQPGTRFILDVAEDADIGANSLQNYKLSPSPSFSL
ITKEKQDGSKYPELVLEKPLDREQQSYHRLVLNAVDGGDPTLSGTTELRIQITDANDNPP
VFNQNVYRVTLRENVPPGTPVLQVSATDQDEGVNSEITYSFHRPGQVFDLNSSTGEITTL
RTLDFEETKKYSIVVEGRDGGGLVAQCTVEIDIQDENDNSPEVTVHALLEMIPENAVPET
LIALIKIHDQDSGENGEVNCRLEGVVPFQIISSSKNSYKLVTDGDLDREQTPEYNVTITA
TDRGKPPLSSRTGITLHIADVNDNTPVFHQASYMVHVAENNPPGASIAQVSASDPDLGPN
GHISYSILASDLEPGALSSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPPLSA
NVSLRVLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARTLGERDATRQRLLVAVRDGGQPSLSATATLHLVF
ADSLQEALPDLTDRREPSDPQTELQFYLVLALALISMLFLLAVILAIALRLRRSSSPAPW
NCFQPGFCSKSGPVVPPNYSEGTLPYSYNLCVAQTGKTEFNFLKCNEQLNSGQEIVCGDS
SGTLFPLCSSSEPTSHPETLTPVSFVSVFSFLPSTQFSIFT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggcgctggggagtggggctgggctgagaggcggcgagtgctctttcccttc
ctgctgtctttgttctgcccggcgctctctgagcagatccgctacaggattcccgaggaa
atgtccaagggctcggtggtggggaacctggccaaggacctagggctcagtgtccacgag
ttaccgactcgaaaactgcgagtcagttcggagaagccttactttgctgtgagctcagag
agtggagagttacttgtgagcagcaggctagacagggagcagatatgcgggaagaagcca
gtgtgtgctctggaatttgaagctgttgctgaaaatccgttgaacttttatcacgtgaat
gtggagatcgaggatgtcaatgaccacacgccaaaattcacgcaaactgcttttgaactt
caaataagtgagtctgcacagcccggcacgcgatttatattagacgtagcggaggatgcg
gatattggcgccaactctctacagaattataaactctctcctagccctagtttctcattg
ataactaaggaaaaacaagatggcagtaaataccccgaactggtgttggagaaaccttta
gaccgggaacaacagagttatcatcgtttagtcctgaatgccgtggacggcggggatcca
accctaagcggcaccactgagctcaggatccagattactgatgccaatgataacccccct
gtattcaaccagaacgtatacagagtcacccttcgggaaaacgtgcccccaggcacccct
gtgctacaggtgtcagccaccgaccaggacgagggcgtcaactcagaaatcacttattcc
ttccacagacctggtcaagtctttgatctgaattcaagtaccggggaaattacaactcta
agaacactggatttcgaagaaacaaaaaaatattctatagtggtggaaggaagggatggg
ggaggactggttgcccaatgtacagttgaaattgacattcaagatgaaaatgacaatagc
ccagaagttacagttcatgctctactcgaaatgattccggaaaacgcagtgccggaaaca
ctgattgctttgatcaaaatacatgaccaagattccggggaaaatggagaggttaattgt
cggttagaaggtgtagtcccttttcagataatttcttcatcaaaaaattcatacaagttg
gtgacagacggagacttggaccgagagcaaacaccagagtacaacgtcaccatcacagcc
actgacagaggcaagccaccactctcctccaggacaggcatcactctgcacatcgctgat
gtcaacgacaacacgccagttttccaccaggcctcctacatggttcacgtggctgagaac
aaccctcctggcgcctccatcgcgcaagtcagcgcttccgacccggatttgggacccaat
ggacatatatcttactccatcttggccagcgacctggaacctggagcgctgtcatcctac
gtgtctgtgagcgcgcagagcggggtggtgttcgcgcagcgcgccttcgaccacgagcag
ctgcgcgccttcgagctgacgctgcaggcacgtgaccagggctcgcccccgctcagcgcc
aacgtcagcctgcgcgtgttggtggacgaccgcaacgacaacgcgcccagggtgctgtac
ccggcactgggacccgacggctcagcgctcttcgacacggtgccgcgcgcagcgcagccg
ggctacctggtcaccaaagtggtggcggtggacgcagactcgggacacaacgcctggctg
tcctaccacgtgctgcaggccagcgagcccgggcttttcagcctggggctgcgcaccggc
gaggtgcgcacggcacgcaccttgggcgaaagggacgcgacccgccagcgcctgctggtc
gccgtgcgcgacggagggcaaccgtccctctcggccactgccacgctgcacctggtcttt
gcagatagcctgcaggaggcgctgccggatctcaccgaccgccgcgagccctctgacccc
caaactgagctgcagttttacctggtcttggctttggccttgatctctatgctcttcctc
ctcgcggtgattctggccattgccctgcgcctgagacgctcctccagccccgccccctgg
aactgctttcagcctggattctgctccaagtctggacctgtagttccccccaactacagt
gaggggactttgccttattcttacaatctgtgtgttgcgcagacaggaaagacagaattt
aatttcctgaaatgtaatgagcaattgaattcaggacaagaaatagtttgtggtgattct
tcagggaccttatttccactttgtagttcaagcgagccaacttctcatcctgagacttta
acaccggtgagtttcgttagtgtcttctcctttttaccatccacccaattttccatattt
acatga
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