Trichechus manatus latirostris (Florida manatee): 101356336
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Entry
101356336 CDS
T05135
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101356336
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101356336
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101356336
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101356336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
He_PIG
Motif
Other DBs
NCBI-GeneID:
101356336
NCBI-ProteinID:
XP_004386894
UniProt:
A0A2Y9E485
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MRGGGNARSSRALAVSWRPATWHPSLDMGRLHRPRSSTSHRNLPHLFLFFLFVGPFSCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRASGRQDQQAPERASVQRNPPLSFSLA
SRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSSDSCLLLLD
VLVLPQEYFRFVKVKIAIRDVNDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDVGT
NGVQTYRLLDYHGMFTLDVEENENGECTPYLIVMGALDRETQDQYVSIIIAEDGGSPPLL
GSATLTIGISDINDNCPLFADSQINVTVYGNATVGTPIAAVQAVDRDLGTNAQITYSYSQ
KVPQASKDLFHLDETTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVITALVSIIKVIF
RPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTVRDPEGKYKVNCYLDGEGPFRLSPYK
PYNNEYLLETTKLMDYELQQFYEIAVVAWNSEGFHDKKIIKVQLVDDNDNAPVFLQPLIE
LTIEENNAPNAFLTKLYATDADSGERGQVAYFLGPDAPSYFSLDSATGILTVSTQLDREE
KEKYRYTVRAVDSGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVI
SVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLYVEAVDGGEPA
LSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIA
YSIIGRRGPRPESFRIDPQTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVNL
FVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRRVESVSCMPTLVALSVISLGSI
TLVTGMGIYICLRKKKKHQREDENLEVQIPLKGKIDLYMRETKPMDISNI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggagggaatgcgcgcagctcgagggcgctggcggtgagctggcgcccggcg
acctggcacccgagcctggatatgggccgtctacatcgtcccaggagcagcaccagccac
aggaacctgccgcatctgtttctgtttttcctcttcgtgggacccttcagctgcctcgcg
agttacagccgggccacggagctcctgtacagcctaaacgagggactgcctgcgggagtg
ctcattggtagcctggcagaggacctgcggctggtgccccgggcctcggggaggcaggac
cagcaggcgccagagcgcgccagcgtccagcggaacccccctctctccttcagcctggcc
tcccgtggactgagtggccagtatgtgaccctggacaaccgctccggggagctgcacact
tctgcccaggagattgacagggaggccctgtgtctggaagggggtggaggggcagcctgg
ggcggcagcatctccatctcctcctccccttcctctgattcttgccttttgcttctggat
gtgctggtcctccctcaggaatacttcaggtttgtgaaggtgaaaatcgccatccgggac
gtcaatgacaatgccccgcagttccccgtttcccagatctcagtatgggtcccggaaaat
gcacctgtaaacactcgtctggccatagagcatcctgctgtggatccagatgtaggcact
aatggggtacagacctaccgattactggactaccatggtatgttcaccctggacgtagaa
gagaatgagaatggggaatgcaccccctatctaatcgtcatgggggctttggatagggag
acccaggaccagtatgtgagcatcatcatagccgaggatggtgggtctccaccactgttg
ggcagtgctactctcaccattggcataagtgacatcaatgacaattgccctctctttgca
gactcacaaatcaatgtcacagtgtatggaaatgctacagtcggcactccgattgcagct
gtccaggctgtggatagagacttggggaccaatgctcaaatcacctactcttacagccag
aaagttccacaggcatctaaggatttattccatctggatgaaaccactggtgtcattaaa
cttttcagtaagattgggggaagtgttctgcaaacacacaagctcaccatccttgctaat
gggccaggctgcatcccggctgtgatcactgccctggtgtccattatcaaagtcattttc
agaccacctgaaattgtccctcgttatatagcaaatgagatagatggtgttgtttacctg
aaagagctggaacctgttaacactccaattgcttttttcaccgtaagagatccagaaggc
aaatacaaggtgaactgctacctggatggtgaaggaccatttaggctatcgccctataaa
ccatacaataatgaatatttactagaaaccacaaagcttatggactatgagctacagcag
ttctatgaaatagctgtagtggcctggaactctgagggatttcatgacaaaaagattatt
aaagtgcaacttgtagatgacaatgacaatgctcctgttttccttcaacccctgatagaa
ctaaccattgaagaaaacaatgcacccaatgcctttttgactaagctgtatgccacagat
gctgacagtggagagagaggccaggttgcatattttctgggacctgatgctccgtcctac
ttttctttagacagtgccacggggattttgacagtttctactcagctagaccgagaagag
aaagagaagtacaggtacacagtcagagctgttgactctgggaaaccacccagagaatca
gtagccactgttgctcttacagtgttggataaaaatgacaacagccctaggtttattaac
aaggacttcagcttttttgtgccagaaaacttcccaggatatggtgaaattggagtaatt
agtgtaacggatgctgatgctgggcgaaatgggtgggtggccctctcggtggtgaaccaa
agtgatatttttgtcatagacacaggaaagggcatgctgagagctaaagtctctttggac
agagaacagcaaagctcctatactttgtatgttgaggctgttgatgggggtgagcctgcc
ctctcctctacagcgaaaatcacaattctccttctagacatcaatgacaaccctcctctt
gtcttatttcctcagtctaatatgtcttacctgttggttctaccttctactctccctggc
tccccagttacagaggtctatgctgttgacaaagacacgggcatgaatgctgtcatagct
tacagcatcatagggagaagagggccgaggcctgagtcctttaggattgacccccaaact
ggcaacattacattggaagaggcattgctgcagacagattatgggctccatcgcttactg
gtgaaagtgagtgatcatggctatccagagcctctccactccacggtcatggtgaatcta
tttgtcaatgacactgtcagcaacgagagctacattgagagtcttttaagaaaggaacca
gaaattaatatagaggaaaaagagccacaaatctcaatagaaccaactcatagaagggtc
gagtctgtgtcttgtatgcccaccttggtagctctgtctgtaatcagcttgggttccatc
acacttgtaacagggatgggcatttacatctgtttaaggaaaaagaaaaagcatcagagg
gaagatgaaaatttggaagtacaaattccactgaaaggaaaaattgacttgtatatgaga
gagacaaaaccgatggatatttctaatatttga
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