Trichechus manatus latirostris (Florida manatee): 101356472
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Entry
101356472 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-23
KO
K16507
protocadherin-16/23
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
101356472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101356472
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Cadherin related
101356472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
101356472
NCBI-ProteinID:
XP_023589250
UniProt:
A0A2Y9R0W6
LinkDB
All DBs
Position
Unknown
AA seq
3332 aa
AA seq
DB search
MNEGRQQRGAASRKRLLLLGRRGSLRRLPGGGGTRVPRTRLGFFLHAWLWAASGSSAQVF
NLSLSMDEGLPPDTLVGDIHAGLPIAQQQEAGGFFPPEDSDDSPLLDDFHVHLDSGIIRT
ARCLDRERLDRYGFVAATLLGAVVQVEIRVNDVKDHSPVFPRDSLQLHVSELSPPGTAFR
LPGAHDPDAGLFSTQGYTLVQLSDLTGDPEGPFFQLRYGTLGPPSPPLLASSSPLGPLDL
VLLRRLDREAAAAHELQIEAWDGGHPRRTGRLRVELRVLDENDNPPVFEQAEYRAALRED
TXPGAEVCHVRATDCDLGPNGHVRYRLLARQAPGAGGEPLGDAAYFVEELSGVVRVQRPR
DREAQAWHQLLVEAWDRGAEPEVATVSVSIAVLEVNDNQPAIHLLFLTEGGAARVSEGAQ
PGDYVALISASDADGDLEKEEEAAGELSVGLGGGGISLSLEGGEGALALRPGGSSGVFFL
CVQGPLDRENRDXVANDAGIPPLSPEEMLLLRVADLNGQPPLFSQEHHRASVSEASAPGT
AVVLISASDANEPGTDRARLRYALIQPLPHCIPETLSSTVRCGPYFTTDPESGVISTMRT
LDPEVHETVELKVVAQDLGEPLLSATCRVSITVDDVNDNEPIFRRQVYNATVAEHSPVGH
CFLQVKASDADAGLYGFVEYSLYDGFQSYEAPRAFQINPHDGQICISQDIDREMIPATYD
LLVKAKDRGGLSAQAFVRVELXDTNDNQSVFNPSAYVTRISGQTQPGTEIISTLGTNRDS
GVYGTVAYELIPGDMLSLFIIDSTTGMSYLTSTLSHLESTTLLLMVCARDGDGLTSAINA
DVTIHILPTTLVPAVFERSKYTFSVYEDVPEGSPVGTVKAREPLNSTEPIFYRITSGSLN
GKFTIHPWLGTICTQKPLDHKTQPVVVLTVQTQLASSPGCSSTEVNITVLDINDXHPAFL
ADSDEIKIFQFTPPGTALYLARAEDKDSGLNGFIQYSIAXPDPSIFTTDQGLGVVFLNGS
LGADARQKHTLMLMAKDIGVPPQASLLVLTVVIEKQESSPPLTFENLVYQVEISESLSPT
AQILQIQAYSLGPQHTSQLMYLLEPSVASAVFGISPYTGWIYLRQQLNYESTQTYNFRVF
AWIPEDRLLQNVSTSVIVRVLDENDNSPNFLHDVLFLKVKDSPVHQGVIGKITAVDRDSG
KNGQLSYFLLSDEKFFKMNPNTGELIGWVALDCEHQAHHQATVLVNHGSPSRNATMVVYI
SVTDINDNKPYFPQCLPGKELHVKRDHGPANTLNLDSFSPDYHPFVRDGSDHFKIDANGD
ELRTTTVPSYDCRPSYRMTVIASDQGMPPLEGQAVVNIQVSPQSQGSTVISQNIRHVVTP
ENLKPMKIMSFIKSPDHLQQHHSGKLHFCIVTDDKDGHFKINGSTGDLFFSKELDYEMTS
HYLFRVVTKDHSKNPPLNSTVFLNIDVEDQNDHSPSFQYEFIVISIEENVPVGTLVYVFN
AKDGDGSFLNSRIQYFIESHHPGMNPFLIHLSFGTLVTASLLDRESVPTVILKITASDQA
VNVTDRQLRSLMVKVVILDVNDHSPMFMSFPIAHIKEDATVGSMVHHITAQDPDEGRNGR
VTYSILSGNENMTFVLDESSGLLTTTCPLDHEIQAQHILTLLAPDDGIPALSSSQTLTIT
VLDINDKAPVFKQLLYNASVRENQNPREFVTRVEATDRDSGINSKLQFEIMPGASFGLFD
INPDTREVVTAATLDREVQEVFTLRVLVRDGGIPSLSSSTMILCTVEDERDHAPEFIVSW
RDTEVXENREPEVIYTVLASDMDAGNNGAVKYYIIDGNTEEYFTINETSGKLSTTRALDR
EQINNFALVILCSDLGDPPRSSVMQLQVTVLDDNDHSLCFLMLHYQSSVREDIEMGAVVL
MLSAMDEDEGPNGQIEYFLMDEASGAFIIDPVAVILRTAHTLDREARSQHTFRAVARDCS
IQCSRSTTVIINVHVTDVNDNDLIWGQNPFDLFLSPQLPANLTIASLRADVPDLGPNGTV
IFSFAETQSVFSIDKHTGEIQLQQSPPSEYLPIWLQLKVMDQGGPARTTTGLLVFHMDGE
DVKLSFTHYLYEGIVTXNCETGTSTVTVKAFTPDSIGGKIKYLIFSXNEDGVFSLCSNSG
ELTVKEPKFLDFEVRNEIQLIVLAEKGGHRAYSKVAVLVQDVNDNLLCFERSVYHASVSE
GQFYNAHIIQVFAAHPDSGLNSLLEYSILSGNPGDVFQIDALSDEITTNMILDYKSTGSC
SLIVQATDKGMPQLSATSVMEIXVTDINDNAPAFLPSEAVEVAENSLPGVIVTQVLVHDV
DLNPAFIFSFTKENNPGIKFIADQNTGIVMLVKTLDFEEATEYELLIQISDSVHYTEGML
MVHVLDVNDNPPVFSQDFYQVKMPKSVPVGYSVLTXSATDVDNKNISYRILSSPMEFSID
PVNDTIFTIHPVSLLDKISTIRFLVEASDGGIPEWKALALVEIEIQDMNSYAPEFTVEYY
NLSLSEDALIGGTFIRFSTFYHDWTHENTHVEYSIISSNSQKHFSVETSCTPPECPYTQV
GYLVLLHSMDREVAVSHQLVVLASDHGCPPLSSIAIISIEVLDVNDNPPKFTRLEYHAHI
KESTFLGSHITVVSANDSDMGSXAEIIYHLISGNERGHFHLEEKTGVLHLLKPLDYEETA
KFTLTVQASDEENKYFSFAIVFVSVLDDNDHTPQFMFPKVNCPVLKNLPVSSTICSVNAL
DFDRGPYGKLTYSXSPCFSTPKQRYDHDLFLTDPFTGDIQAKQILDHELENKYCITVQAK
DKDDATAFLILWVDIEGIDEFEPIFIQDQYFFNLPYKSEVRQLIGKVEASDVDAGIEGII
LYSLGTTSPFFSVNKTNGNIYLTRALPLVKSYISKEDIIEMNIIAHSPKLDSKFTSCTVF
VNVSFSPEGKYSAVSANSFSISLTASFLVFLLLVFILIILVLRHKQKDTVNNYEKKKTSS
SLDVNLRLTGDVNMLKAFQKTNDCSNEEVPVDSLPXISIMEKDIVHLYRHSNSSSHCSVE
GETAEDKEIQRINEHSYRKDSGSALIDRDSRVPDSGIPRDSDQLSCLSGETDLVVTVETE
KRHTLEEGDGGGSHGTTYIQNDALPPTLXKRGVKEDILADVRKDYIFISGDQEARGAAPS
TQISSDHDVRDGGIXDRLLSWEPKFQPLASVFNDIAKLKDEHLHMPGLPKDKKCFVFPQL
LITAVAXSGIRALPPRMPATTSGQVLQKYPYSPILYHLXSLPEAMTPSFSPSLSLLTIQT
PAMSSLLSSAELLGTHLSSSCHERKAEDEAQI
NT seq
9999 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagggcgtcagcagcggggggctgcctcccggaagcgcctcctgctccttggg
aggagagggtcactccgcaggctgccgggcggcggcggcacccgggtgccgcgcacccgg
ctcgggttcttcttgcacgcgtggctgtgggcggcctcgggctcatctgcccaggtgttc
aacctcagcctttccatggacgaggggcttcccccagacacgctggttggagacatccac
gccgggctgcccatagcgcagcagcaggaggcgggtggcttttttccgcccgaggactcg
gacgactccccgctgctggacgacttccacgtgcacctggacagcggcatcatccgcacc
gcgcggtgcctggaccgtgagcggctggaccgctacggcttcgtggccgctacgctgctg
ggcgccgtggtgcaggtggagatcagagtcaacgacgtgaaagatcactcgccggttttt
ccccgtgactccctgcagctccacgtctccgaactcagcccgccaggtaccgccttccgc
ctgccaggtgcccacgaccccgacgccgggctgttcagcacccagggctacaccctggtg
caactgtccgaccttaccggggaccccgaaggaccattcttccagttgcgctacggaacc
ctggggccaccgtcgcctcccctgctggcctcctcgtcgcccctggggcccctggacctg
gtgctgctgcggcgcttggaccgagaggcggctgcggcgcacgagctgcagatcgaggcg
tgggacggcggccacccgcggcgcaccggtcgtctgcgagttgagctccgcgtgctggat
gagaacgacaacccgccagtctttgagcaagcagagtaccgcgcggctctgcgtgaggac
accnccccgggcgccgaggtctgtcacgtgcgcgccaccgactgcgatctggggcccaac
ggtcacgtgcgctaccgcctcctcgcccgccaagcgcccggggcgggcggcgagcctctg
ggcgacgcggcctacttcgtggaggaactgagcggcgtggtgcgagtgcagagaccgcga
gaccgcgaggcgcaggcctggcaccagctgctggtcgaggcctgggaccgaggcgccgag
cccgaggtcgccaccgtgagcgtgtccatcgcagtactggaggtgaatgacaaccaacct
gccattcacttgctcttcctcaccgagggcggcgccgcccgcgtctctgaaggcgcccag
cccggcgactatgtggctctcatctcggcgtccgacgcagacggcgacctggagaaggaa
gaggaggccgctggggagcttagtgtgggcctcggaggcggaggcatctcactgtccttg
gagggtggggagggagccttggcgctgagacccggcggctcctccggagtattttttctt
tgcgtccaggggcccctggaccgggagaaccgcgacngggtagcgaacgacgcagggatc
ccgccgctgagccccgaggagatgctgctgctccgtgtcgctgacctcaacggccagccg
ccgctgttcagccaggagcaccaccgggcctcagtttctgaggcctcagccccaggcact
gcagtcgtgttgatcagcgcctcggatgccaacgaacctggcacagaccgcgcccggctg
cgttacgcgttgatccaacctctgcctcactgcattccggagactctgtcgtccacggtg
aggtgcgggccatacttcaccactgatcccgaaagtggtgtgatcagcaccatgcggact
ttagacccagaggtccatgagacggtggagctgaaagttgtggctcaggacctcggagag
ccgctgctttctgccacctgccgggtgagcatcaccgtggatgatgtgaatgacaacgag
cccatcttccggaggcaggtgtacaatgctaccgttgcggagcatagcccagtcggacac
tgctttctgcaggtgaaagcctccgatgcagatgcagggctttatggatttgttgaatat
tctctttatgatggattccaaagctatgaagcacctcgggcattccagatcaacccacat
gatggacaaatctgcatttctcaagatatcgacagggaaatgattccagccacctatgat
ctcttggtaaaagccaaagacaggggtgggctaagcgcccaagcctttgtccgtgtggaa
ctgtaggacaccaatgataatcaatctgtgtttaacccgtcagcctacgtgacgagaatc
agtggtcagacccagccgggcactgagatcatcagtactcttggcaccaacagagattct
ggggtatatggaacagtggcttatgagctcattcccggagacatgttatccctttttatc
attgactccacaacaggtatgagttatttaacatcaactcttagtcatttggaatctact
acacttctgctgatggtctgtgctcgagatggtgatgggctcacatctgccattaatgct
gatgtcactatacacattcttccaacaactctggtgcctgccgtttttgaaaggtccaag
tatactttctcagtttatgaagatgtgcctgaaggcagtcctgttggaacagtgaaagca
agagagcccttgaattccacagagccaatcttttacagaatcacttccggcagtctgaat
ggaaagttcactattcacccatggctgggcaccatttgtacccagaagcctctggatcac
aaaacgcagcctgtggttgtgctcaccgtccagacgcagctggccagctccccaggctgc
agcagcacagaagtcaacataactgtcctcgacatcaatgatnaacacccagcttttctc
gcagactctgacgagattaaaatatttcagttcacaccacctggcacagctttgtacctc
gcacgagcagaagacaaagacagtggcctgaatggatttattcaatactccattgccnag
ccagacccaagcatcttcaccactgaccaaggccttggtgtggtgttcctcaatgggagt
ttgggagcggatgcgcggcagaagcacacgctgatgctcatggccaaggacatcggagtt
cctcctcaggcatccctgttggtgctgacagtagttattgaaaaacaagaatcaagtcca
cccttgacttttgaaaatttggtctatcaagtagaaattagtgaatccctctcaccaact
gcccaaatactgcaaatacaggcctactcacttggcccacagcacacttcacagctcatg
tatttgctggaacccagtgtagcctctgctgtgtttggcatcagcccttacacaggttgg
atttatttgcggcaacagctcaactatgaatccacacaaacatataattttagagtattt
gcctggattccagaggacagattgttgcaaaatgtgagcacctcagtaattgttcgtgtc
ctggatgagaatgacaattcccctaacttcttgcatgatgtgttgtttctgaaagtcaag
gacagtcctgttcaccaaggggtcataggcaagattacagcagttgacagagactctggg
aagaatggacagctctcatatttccttttgtctgatgaaaaattcttcaagatgaatcct
aatacaggtgaacttataggttgggtggcattggattgtgagcatcaagcacaccatcag
gcgactgtcctagtgaaccacggctccccatcacgcaatgccacgatggtggtttacatc
tccgttactgacatcaatgataacaagccgtatttcccacagtgtctccctggaaaggag
ttacacgtcaagagagaccatggccctgccaacaccctgaatttggattccttttctcca
gactaccacccgtttgtcagagatggttctgatcactttaagattgatgccaacggtgat
gaactaagaacaaccacagtaccttcgtatgattgtagaccttcctacaggatgactgta
attgccagtgaccagggcatgcctccccttgaaggacaggcagttgttaatattcaggtg
tcaccacaatcccaagggagcaccgtcatttctcagaatattagacatgtggttacacca
gaaaacttaaagcctatgaaaataatgagctttataaaatcacctgaccaccttcaacaa
catcatagtggaaagttacatttttgtatagttacagatgacaaagatggtcattttaaa
attaatggctcaacaggagacttgttcttttctaaggaacttgattatgaaatgacatcc
cattatctcttcagggtggttactaaagaccatagcaaaaatcctcccctgaatagcaca
gtcttccttaatattgatgtggaagaccagaatgaccattccccatctttccagtatgag
ttcattgtgataagtatagaagagaatgttcctgtaggtactctggtgtatgttttcaat
gccaaagatggtgacggcagttttttgaacagcagaatacagtacttcattgaatcccac
caccctgggatgaacccatttctcatccacctgtcatttggcacactggtcactgcatcc
ctccttgacagagagagtgttcccacggtcatcctgaaaataactgcatccgatcaggct
gtgaatgtgacagaccggcaactgaggtcactgatggtgaaggtagtaattttagacgtg
aatgaccacagccccatgttcatgtccttccccattgcccacatcaaagaagatgccacg
gtgggctccatggtgcaccacataactgctcaagatccagatgaaggaagaaatggaaga
gtaacatacagcatcctctcaggaaatgaaaacatgacatttgtactagatgagtcatca
ggtctactaactacaacttgtcctttggatcatgaaatccaagcacagcacattttgacc
cttctggcaccagatgatggaataccggcactttcttcatcccagaccttgacaattact
gttcttgatataaatgacaaggcaccagtgtttaagcagctcctgtataacgcatcagtt
agagaaaaccaaaatccaagagagtttgtcacaagggtagaagctacagatagagattca
ggaatcaattccaagcttcaatttgaaatcatgccaggtgcttcatttgggttgttcgat
atcaatcctgacacgagagaggtagtgacagctgccacactcgacagagaagtccaggaa
gtcttcaccctcagagtacttgtgcgtgatgggggcatcccttcgttgtccagctccacc
atgattctctgcactgttgaagatgaacgtgatcatgcaccagagtttatcgtctcctgg
cgtgacactgaggtcncagaaaaccgagagccggaggtcatctatactgttttggcctct
gatatggatgctggcaataatggagctgtcaagtattacatcattgatggaaatactgag
gagtactttactattaatgaaacatcaggaaaactgtcaactactcgtgctttggaccgg
gagcagatcaacaactttgcccttgtcatcctgtgctctgatctgggggatccacctaga
agctctgtgatgcagctgcaagttacggttttggatgacaatgatcacagcctctgcttc
ctcatgcttcattaccagtcctctgtgagagaagatattgaaatgggagcagtggttctc
atgctctctgctatggatgaagatgaaggcccaaatgggcaaattgagtattttctgatg
gatgaggcttctggtgcatttatcattgaccctgtggcagtcatattgagaactgcccac
accctcgaccgagaagccagatcccagcatacattcagggcggtggccagagactgtagc
atccagtgctcaagaagcaccacagtaattataaatgtgcatgtcactgatgtcaatgac
aatgatctaatctgggggcagaacccctttgatctttttctttccccccagttgcctgca
aacctgacgattgccagcctgagagctgatgtcccagacctggggcccaatggaactgtc
atttttagttttgcagaaacccagtcagtgttttctattgataaacatacaggagaaatt
cagcttcagcaaagcccaccttcagaatatcttcctatctggcttcagttaaaagttatg
gaccaaggaggcccagccaggacaaccactggtctcttggtctttcacatggatggagaa
gatgtaaagctttccttcactcactatctctatgaaggaattgtgacataaaattgtgaa
acaggtacttccactgtgactgtaaaagcttttactcctgactcaattgggggcaagatt
aaatatttgatttttagtnggaatgaagatggagtattttccctgtgctctaactcagga
gaactcactgtgaaagaacccaagtttcttgattttgaagtcagaaatgaaatacaactc
atcgtgttagctgaaaagggtgggcatagagcctacagcaaagtagcagtcttggtccag
gatgtgaatgataatttactgtgttttgagagaagtgtttaccatgcatcggtgtctgaa
ggccagttctacaatgctcatatcatacaggtttttgctgctcacccagacagtgggttg
aacagcctccttgagtattccattctttctggcaacccaggagatgtgtttcagattgat
gcactgagtgatgagataacaactaacatgattctggattacaagtccaccggctcctgc
agcttgattgttcaagccacagacaaagggatgccccagctttctgctacaagtgtgatg
gagatataggtgactgacataaatgacaatgccccagctttccttccctcagaagccgtg
gaagtggccgaaaattctttgcctggtgtaattgtgactcaggtattagttcatgacgta
gatttgaatccagctttcatcttcagtttcaccaaagagaataatcctggaatcaagttt
attgctgatcagaacactgggatagtgatgctggtgaaaacattggattttgaagaagct
actgaatatgagctgctcatccaaatttctgattcagtgcactacacagagggaatgctc
atggtccatgtgttggacgtcaatgataatccaccagtgttttctcaagatttctatcag
gttaagatgcctaagtcagtacctgtggggtactcagtgctgactntgtcagccacagac
gtggacaacaagaacatttcttacagaatcctttcctctcctatggagttctcaattgac
cctgtgaatgacacaatatttaccatccatcctgtatcacttctggataaaatatcaaca
attcgatttcttgttgaagctagtgatggtggaattcctgagtggaaagctcttgcatta
gtggagatagaaatacaagatatgaacagttatgctcctgagtttacagtagaatactac
aatcttagcttaagtgaagatgccctaattggaggcacctttatcagattttcaactttt
tatcatgactggacccatgaaaacacacatgttgagtattccatcatcagcagtaattca
cagaaacatttcagtgtggaaactagttgcactcctccggaatgtccttacactcaagtt
ggttatcttgtgttgcttcacagtatggacagagaagtagctgtaagtcatcagcttgtt
gttctagcatctgaccatggctgccctccattgagttccatagccatcatatcaatagaa
gtacttgatgtcaatgataatccacctaaattcacccgtctagaatatcatgctcacatc
aaggaaagtacatttttagggagtcacatcactgtggtctcagcaaatgacagtgacatg
ggttcanatgctgaaatcatctaccacctaatctctggaaatgagagggggcattttcac
ttagaagaaaaaactggagttctgcatttgcttaaacctctggattatgaggaaacagca
aaattcactttaactgtccaagcttcagatgaagaaaataaatatttttcttttgcaatt
gtgtttgtcagtgtcctggatgataatgaccacacacctcagtttatgttccccaaagtg
aactgtcctgttctaaaaaatctgcctgtatcctctaccatatgttctgtaaatgcttta
gattttgacaggggtccttatggaaaactgacatattctnnatcaccctgttttagcact
cctaaacaacgttatgatcatgatctcttcctcactgatccttttactggggatatacag
gctaagcaaatccttgaccatgaacttgaaaataaatactgcatcacagttcaggcaaaa
gacaaagatgatgcaacagccttcttaatcttgtgggtggatattgaagggatagatgaa
tttgaaccgattttcatacaagatcaatattttttcaaccttccatataaaagtgaagta
agacagttgattggcaaagtggaagcatcagatgttgatgctggtattgaaggaattatt
ctttactcccttggaaccacatctcctttcttttcagtaaataaaactaatggaaatatc
tatttgactagagccctgcccctagtaaaaagttacattagcaaagaagacattattgaa
atgaacataatcgctcacagccctaaactggactccaagtttacatcttgcactgttttt
gtgaatgtgtcattttcccctgaaggaaaatactcagcagtatcagccaacagtttttca
atcagccttacggcttcctttctagtgtttctgttgctggtattcattctaattatacta
gttttaagacataaacaaaaagatacagtaaacaattatgagaaaaagaaaacctcatct
tccttagatgtcaatttgagattgactggcgatgtcaatatgctcaaggccttccagaaa
acgaatgattgcagtaacgaggaagtgcccgtggactccctgcctngcataagcatcatg
gagaaggacatagtacatctgtacagacactcaaattccagcagccactgttctgtggaa
ggagaaactgcagaagataaggaaatccagaggataaatgagcattcttacaggaaggac
tctggttcagctctgattgatcgggattccagagtgccagattctggaatcccaagggat
tcagaccagctctcctgcttgtctggagaaactgacctggtggtcactgtggaaacagaa
aagaggcatacactggaggaaggagatggaggaggaagccatggtacaacctacattcaa
aatgatgctttacctcctacactttagaagagaggggtaaaagaggacatcctggctgat
gtcagaaaagattacatcttcatttcaggtgatcaggaagcaagaggtgcagctccttca
acccagataagctctgatcacgatgtaagagatggtggtatctgagaccgtctcctcagt
tgggaacccaagtttcaacctcttgcctcagtatttaatgatattgcaaaactgaaagat
gaacatttgcatatgcctggtcttccaaaagataagaaatgttttgtttttccacaactt
ttgataacagcagtagcctagtctggaattagagcacttccaccaagaatgccagccaca
acttcagggcaggtacttcagaaatacccatactcccccattctctaccatctcnattct
ctgccagaagccatgactcccagtttttctccatctctttccctattgaccatacagact
cctgccatgtcttcactgttgtcaagcgcggaattattaggaacacacttaagtagttct
tgccatgaaaggaaagcagaagatgaagctcaaatataa
DBGET
integrated database retrieval system
