Trichechus manatus latirostris (Florida manatee): 101357504
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Entry
101357504 CDS
T05135
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101357504
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101357504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
101357504
NCBI-ProteinID:
XP_004386900
UniProt:
A0A2Y9E655
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All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGGRSK
SGSYRVLENSAPHLLDVDAESGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIKV
EIQDINDNAPSFPSDQIEVDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLFS
LDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDNS
PVFEAPSYMVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPKT
GLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQGA
LSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGLGGPGGSVPFKLEENYDNF
YTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQV
HENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFN
YEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNA
GLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVEL
VVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILLA
AMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAMN
VMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHASFTGQGT
NASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSD
QDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQEECVNCTDECRVLGHSDRCWMPQFPAA
NQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKA
KRALSPLLQEVPSASSSPTKACIEPCASTKGSLDGCEAKPGAPAEASSQYLPTDSQYSSP
SKQPRDPPLMASDQTARVFADVHSRGSRDSSEMGAVLEQLDHTSRDLGRESVDAEEVVRE
IDKLLQDCRGNDPVAVRK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgcttcctcctctgggcccctgccctaacgctcaaaaac
ctcaactactccgtgccagaggagcaaggcgccggcacggtgatcggcaacatcggcaaa
gatgctcgcctccagccagggcttccgcccgcggagcgtggcggcggcgggcgcagcaag
tcgggtagttaccgggtgctggaaaactcggcgccgcacctgctggacgtggacgccgag
agcgggcttctctacaccaagcagcgtatcgaccgcgagtccctgtgccgccacaacgcc
aagtgccagctgtccctcgaggtgttcgccaatgacaaggagatctgcatgatcaaggtg
gagatccaggacatcaacgacaacgcgccttccttcccttcggaccagatcgaagtggac
atctcggagaacgcggccccaggcacgcgcttccccctcactagtgcccacgacccggac
gccggcgagaacggactccgcacctacttgctcacccgcgacgaccacggccttttctcg
ctggatgtcaagtcccgcggcgatggcaccaagtttccggagttggtcatccagaaggcg
ctggaccgcgaacagcaaaaccaccacacgctcgtgctgacggccctggatggaggtgag
cccccgcgctctgccaccgtgcagatcaatgtgaaagtgatcgactctaacgacaacagc
ccggtcttcgaggcgccctcctacatggtggagctgcccgagaacgcccctctgggcacc
gtggtcatcgacctgaacgccaccgacgccgacgagggccccaacggcgaggtgctctac
tccttcagcagctacgtgcccgaccgcgtgcgggagctcttctccatcgaccccaagacc
ggcctgatccgtgtcaagggcaacctggactatgaagaaaacgggatgctggaaatcgac
gtgcaggcccgagacctggggcccaaccccatcccggcccactgcaaggtcactgtcaag
ctcatcgaccgcaacgacaatgcgccgtccatcggtttcgtctccgtgcgccagggggcg
ctgagcgaggccgcccctcccggcacagtcatcgccctggtgcgggtcaccgaccgcgac
tcgggcaagaacgggcagctgcagtgccgcgtcctgggcggagggggcacgggcggcggt
gggctgggcgggcccgggggctctgtacccttcaagcttgaggagaattatgacaacttc
tacacggtggtgactgaccgcccgctggaccgcgagacgcaggacgaatacaatgtgacg
atcgtggcgcgggatgggggttcgcccccgctcaactccaccaagtcattcgccgtcaag
atcctggacgagaatgacaacccccctcgtttcaccaagggtctctacgtgctgcaggtg
catgagaacaacatcccaggagagtacttgggctccgtgctcgcccaggaccccgacctg
ggacaaaacggcacagtgtcctactccatcctgccctcgcacatcggcgacgtgtccatc
tacacctatgtgtctgtgaaccccaccaacggggccatctatgccctacgctccttcaac
tacgagcagaccaaggcttttgagttcaaggtgcttgctaaggactcaggggcacccgct
cacttggagagcaacgccactgtgagagtgactgtgctggatgtgaacgacaacgctccg
gtgatcgtgctgcccacgctgcagaacgacacggccgagctgcaggtgcctcgcaacgct
ggcctgggctacctggtgagcactgtgcgcgccctcgacagcgactttggcgagagcggg
cgcctcacctacgaaatcgtggacggcaatgacgaccacctgttcgagatcgacccgtcc
agtggcgagatccgcactctgcaccccttctgggaggacgtgacgcccgtggtggagctg
gtggtaaaggtgacagaccacggcaagcccaccctgtccgccgtggcaaagctcatcatc
cgctcggtgagcggttccctgcctgagggggtgcctcgagtgaatggcgagcagcaccac
tgggacatgtcgctgccgctcatcgtgactctgagcactatctccatcatcctcctagcg
gccatgatcaccatcgcggtcaaatgcaagcgcgagaacaaggagatccgcacttacaac
tgccgcatcgctgagtacagccacccgcagctgggcgggggcaagggcaagaagaagaag
atcaataaaaatgacatcatgctggtgcagagcgaggtggaggagaggaacgccatgaac
gtcatgaacgtggtgagcagtccctccctcgccacctcccccatgtacttcgactaccag
acccgtctgcccctcagctcgccccggtccgaggtgatgtacctcaaaccggcttccaac
aacctgactgtcccacaggggcacgcgggctgccacgccagcttcaccggacaagggact
aatgcgagcgagacccccgccactcggatgtccataattcagacagacaattttcccgca
gagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaaggat
ccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgacagtgac
caagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaa
acgacttcaactaaaagtcaaccacttgaacaagaacaagaagagtgtgttaattgcaca
gatgaatgccgagtgcttggtcattctgacaggtgttggatgccacagttccctgcagcc
aatcaggctgaaaatgcagattaccgcacaaatctctttgtacccacagtggaagctaat
gttgagactgagacttatgaaactgtgaatcccactgggaaaaagacattttgtacgttc
ggaaaagacaagcgagagcacactattctcattgccaatgttaaaccttatttaaaagcc
aaacgtgccctgagccctctcctccaagaggtcccctcagcatccagcagcccaaccaag
gcatgcattgagccttgcgcctcaacaaaaggctctctggatggttgtgaagcgaaacct
ggagccccggctgaagcaagcagccagtacttgcccactgacagtcagtattcgtcgccc
agtaagcagccaagagaccctcccttgatggcgtccgatcagacggcgagggtcttcgcg
gatgtgcattccagaggcagccgggattccagtgagatgggagctgttcttgagcagctt
gaccacaccagcagggatctgggcagagagtcggtggacgccgaggaagtcgtgagagaa
attgataagcttttgcaggactgccgggggaatgaccctgtggctgtaagaaagtga
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