Trichechus manatus latirostris (Florida manatee): 101360089
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Entry
101360089 CDS
T05135
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101360089
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Cadherin related
101360089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
EphA2_TM
Cadherin_C_2
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
101360089
NCBI-ProteinID:
XP_023595165
UniProt:
A0A2Y9RIY7
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MDKDAPMHFAGEICGFKIHGQNVPFDAVVVDKTTGEGLIRSKEKLDCELQKDYTFTIQAY
DCGKGPDGTSVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGKQYDSILRVEAVDAD
CSPQFSQICSYEVVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATEDV
LVKISIKPTCTPGWQGWNNRIEYEPGTGALSLFPNVHLETCDEPVASVQATVELETSHIG
KGCDRDTYSEKSLHRLCGAASGTAELLPSPSSSLNWTAGLPTDNGHDSDQVFEFNGTQAV
RIPDGVVSVNPKEPFMISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFLL
RQDPSEEKKYKPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYLDGVSHEPFSVMEDYPLH
PSKIETQLVVGACWQGGDLHMTQFFRGNLAGLTIRSGKLADKKVIDCLYTCKEGLDLKVP
KDSGKGMKIQANPSQSMLTLEGEDIGELDKAMQHISYLNSRQFPTPGIRRLKITSTVKCF
SEAPCISIPPVDGYVMVLQPEEPKISLSGIHHFARAASEFESSEGVFLFPELRIISTITR
EVEPERDDDEDPTVQESLVSEEIVHDLDTCEVTVEGEELNQEQESLDVDMTRLQQKGIEM
SSSDLGVVFTGVDTMASYEEALHLLRYRNWHTRSLLDRRFKLVCSELNGRYVSNEFKVEV
NVIHTANPVEHASHLAAQPQFVHPEHRSFVDLSGHNLASPHPFAVVPSTATVVIVVCVSF
LVFMIILGVFRIRAAHQRTMRDQDAGKESEMDWDDSALTITVNPMETYEDQHSSEEEEEE
EEEESEEGEEDDDITSAESESSEEEEGGHGEQAGASRQQQLEWDDSTLSY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggataaagacgcacctatgcactttgcaggtgagatttgtggatttaaaattcatggg
cagaatgtcccctttgatgcagtggtagtggataaaaccaccggtgagggactgattcgc
tccaaagagaaactggactgtgagctgcagaaagactacacgttcacaatccaggcctat
gactgtgggaaggggcccgacggcaccagcgtgaagaagtctcataaagcaactgtccac
attcaggtgaacgatgtgaatgagtatgcacctgtattcaaggagaagtcctacaaggcg
acagtcgtcgaggggaagcagtacgacagcatcctgagagtggaggcggtggacgcagac
tgctccccgcagttcagccagatttgcagctatgaagttgtcaccccggatgtcccattt
actgttgacaaagatggttatataaaaaacacagagaagttgaactatgggaaagaacat
cagtacaagctgacagtcactgcctatgattgtgggaagaaaagagccacagaagatgtt
ttggtaaagatcagcatcaagcccacctgcacccctgggtggcaaggatggaacaatagg
attgaatatgaacctggcactggtgctttgtccctcttccccaacgtccatctggagaca
tgtgacgagcctgtcgcctctgtccaggccacggtggagctcgagaccagccacataggc
aaaggctgtgaccgcgacacctattctgagaagtcccttcaccggctctgtggtgctgct
tccggcactgccgagctgctgccctccccaagcagctccctcaactggaccgccggcctc
cccactgacaacggccacgacagcgaccaggtctttgagttcaatggcacgcaggcagtg
aggatcccagatggcgtcgtttcagtcaacccgaaagagccttttatgatttctgtgtgg
atgcggcatgggccttttggcaggaagaaagagaccattctttgcagttcagacaaaaca
gatatgaaccggcaccattattcactctatgtccatggttgccggctcattttcctcctc
cgtcaggatccttcagaggagaagaaatacaagcctgcagaattccactggaagttgaat
caggtctgcgatgaggaatggcaccactacgtcctcaatgtggaattcccaagtgtgact
ctctacctggacggcgtttctcatgagcctttctctgtgatggaggattacccacttcat
ccatccaagatagagactcagctcgtggttggagcttgttggcaaggtggcgacctgcac
atgacccagtttttccgaggtaatctggctggcctaacgatccgttctgggaaacttgcg
gataagaaggtgatcgattgtctatatacctgcaaagaggggctggacttgaaagtcccc
aaagacagcggcaaaggcatgaagatccaagcaaaccccagtcagtccatgttgaccttg
gagggcgaggatattggggagttggataaggccatgcagcatatttcctacctgaactct
cgccagttccccactcctggaatccggagactcaaaatcaccagcacggtcaagtgtttc
agtgaggccccctgcatctccatccccccagtggatggctatgtgatggttttgcagccg
gaggagcccaaaatcagcctgagtggcatccaccattttgctcgggcggcgtccgaattt
gaaagctcagagggggtgtttctcttccctgagcttcgaatcatcagtaccatcacgaga
gaagtggagcccgaacgggatgatgacgaggaccccacagttcaagagtccctggtgtct
gaggagattgtgcatgacctggatacgtgtgaggtcaccgtggagggagaggaactgaac
caagagcaggagagcctagacgtggacatgacacgcctgcagcagaagggcattgagatg
agcagctccgacctgggtgtggttttcacaggcgtggacaccatggccagctatgaggag
gcgctgcacctgctgcgctaccgcaactggcacaccaggtccttgcttgaccgcaggttc
aagctcgtctgctcagagctgaatggccgctacgtcagcaacgaattcaaagtggaggtg
aatgtaatccacacggccaaccccgtggagcatgccagccacttggctgcacagccacag
tttgtgcaccctgagcaccgctccttcgttgacctgtcggggcacaacctggccagtccc
catccctttgcagtcgttcccagcactgccactgttgtgattgttgtgtgcgtcagcttc
ttggttttcatgattatcctgggagtgttccggatccgggctgcccaccagcgaaccatg
agggaccaggatgcagggaaggagagcgagatggactgggacgactctgccttgaccatc
actgtaaaccccatggagacttacgaggaccagcacagcagcgaggaggaggaggaagag
gaggaggaggagagcgaggagggtgaggaggacgacgacatcactagtgccgagtcggag
agcagtgaggaggaggaaggggggcatggggagcaggcgggcgccagcaggcagcagcag
ctagaatgggatgactccactctcagctattga
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