Trichechus manatus latirostris (Florida manatee): 101361239
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Entry
101361239 CDS
T05135
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101361239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tmu04990
]
101361239
Domain-containing proteins not elsewhere classified [BR:
tmu04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
101361239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
Laminin_G_3
Syndecan
Motif
Other DBs
NCBI-GeneID:
101361239
NCBI-ProteinID:
XP_004390339
UniProt:
A0A2Y9EAH9
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MRLRLFCILLAAVSGARGWGYYGCDEELVGPLYARSLGASSSYGFFTAPRFARLHGISGW
SPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNA
TFFGNVNESAVVRHDLHYHFTARYIRIVPLAWNPRGKIGLRLGVYGCPYKSDVLYFDGDD
AISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELQGAHLLLHMSLGSS
PIQPRPGHTTMTAGGVLNDQHWHYVRVDRFGREANLTLDGYVQRFVLNGDFERLNLDNEM
FIGGLVGAARKNLAYRHNFRGCMENIIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPH
PINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSSLGDGLGHVELMLSEGQVNV
SIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTS
YFFGGCPKPANRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEFRRLGHFAEILFDTCGIT
DRCNPNMCEHDGRCYQSWDDFICYCELTGYKGETCHQPLYKESCEAYRLSGKTSGNFTID
PDGSGPLKPFVVYCDIRENRAWTVVRHDRVWTTRVTGSSMERPFLGAIQYWNASWEEVSA
LANGSQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDQ
SCVDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVVGDTNRSNSEAQFFLRPLRCYGD
RNSWNTISFHTGATLRFPPVRANHSLDVSFYFRTSASSGVFLENIAGPYCQWRRPYLRVE
LNTSRDVVFAFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPM
PLQTYIWLEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHC
AHPRLPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAA
QEFSHMLSRPVPGYEPGYVPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTG
EEVSFSFSTSSAPAVLLYVSSFVRDYMAILIKEDGTLQLRYQLGTSPYVYQLTTRPVTDG
QPHSVNITRVYRTLFIQVDYFPMTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRY
NTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEVP
PELDPWYLPPDFPYYHDDGWVAVLLGFLVAFLLLGLVGMLVLFYLQKHRYKGSYHTNEPK
ATHDYQPGSKPPLPTSDSVQAPAPTPGPTPAPAPGQAPAPRDQNLPQILEESRSE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccggctcttctgcatcctgcttgcagcggtctcaggagctcggggctggggc
tactacggctgcgacgaggagctggtggggcctctgtatgcgcgctcgctgggcgcctcc
tcctcctacgggttcttcactgcgccgcgcttcgcccggctgcatggcataagcggatgg
tcgccccggatcggtgacccgaatccctggctccagatagacctaatgaagaagcaccgg
atccgggctgtggccacacagggctcctttaactcgtgggactgggtcacacgctacatg
ctgctctacggcgaccgcgtggatagctggacaccgttctaccagcgagggcataacgcg
accttctttggtaatgtcaacgagtcggccgtggtgcgccacgacctacattaccacttc
acggcgcgctacatccgcatcgtgccgctggcctggaaccctcgcggcaagatcggcctg
aggctcggcgtctacggctgcccttacaagtccgacgtgctctattttgacggcgacgac
gccatttcataccgcttcccgcgaggggtcagccggagcctatgggacgtgttcgccttc
agcttcaagaccgaggagaaggacgggctcctgttgcatgctgagggcgcgcagggcgac
tacgtgacgctcgagctgcagggggcacacctgctgctgcacatgagtctgggcagcagc
cccatccagccgaggccgggtcacacgacgatgaccgcgggaggcgtccttaacgaccag
cactggcactatgtgcgtgtggaccgatttggccgcgaagccaacctcaccctggacggc
tacgtgcagcgcttcgtgctcaatggtgactttgagcggctgaacctggacaacgagatg
ttcattgggggtctggtgggcgctgcgcgtaagaacctcgcctatcggcataatttccgc
ggctgcatggagaacataatcttcaatcgagtcaacatcgccgacttggctgtgcggcgc
cactcccggatcaccttcgagggtaaggtagcgttccgttgcctggacccggttccgcac
cccatcaactttggaggccctcacaacttcgtgcaagtgcctggctttccgcgccgcggc
cgcctcgcagtctcctttcgcttccgcacctgggacctcacagggctgctactgttctcc
agcttgggggacgggctgggccacgtggagctgatgctcagtgaagggcaggtcaacgtg
tccatcgcgcagaccggtcgcaagaagcttcagttcgcggctgggtaccgcctgaatgat
ggcttttggcacgaggtgaattttgtggcgcaggaaaaccatgcagtcattagcattgat
gatgtggagggggcagaggtcagggtctcttacccactgcttatccgtacagggacctca
tacttctttggaggttgtcctaagccagccaatcgatggggctgccactccaaccagaca
gcatttcatggttgtatggagctgctcaaggtggatggtcaactggtcaacctgactctg
gtagagttccggaggcttggacactttgccgaaatcctctttgacacatgtggcatcact
gataggtgcaaccctaacatgtgtgagcatgatggacgctgctaccagtcttgggatgac
ttcatctgctattgtgaactgacaggctacaagggggagacttgtcaccaacctttgtat
aaggaatcctgtgaggcttatcggctcagtgggaaaacttctggaaactttaccattgat
cctgatggcagtggccctctgaagccatttgtagtgtactgtgatatccgagagaaccga
gcatggacagttgtgcggcatgacagggtgtggacaacccgggtgacaggttccagcatg
gagcggccattcctgggggccatccagtactggaatgcatcctgggaggaagtcagtgcc
ctggccaacggttcccagcactgtgaacagtggatcgagttctcctgctacaactcccgg
ctactcaatactgcaggaggctacccctacagcttttggattggcagaaatgaggagcag
cacttctactggggaggctcacagcctgggatccagcgctgtgcctgtggtctggaccag
agctgtgtggaccctgccctgcactgcaactgtgatgccgaccagccccagtggagaacc
gacaagggactgctgacctttgtggaccatctgcctgtcacccaggtggtggtgggggat
acgaaccgctccaattcagaggcccagttcttcctgaggcctctgcgctgctatggcgat
cgaaactcctggaacactatctccttccacactggggctacactacgctttcccccagtc
cgtgccaaccacagccttgatgtctccttctacttcaggacctcggcttcctcaggagtc
ttcctagagaatatagcaggcccttactgccagtggcgccgaccctacctgcgggtggaa
ctcaacacatcccgggatgtggtcttcgctttcgatgtggggaatggggatgagaacctg
acagtgcactcagatgactttgagttcaacgatgacgagtggcacctggttcgggctgaa
atcaacgtgaagcaggcccggctccgtgtggatcaccggccctgggtgctgaggcctatg
cccctgcagacctacatctggctggagtatgaccagcccctctatgttggttctgcagag
ctcaagaggcgcccctttgtgggttgcttgagggccatgcgtctgaatggagtgactctg
aacctggagggccgtgccaatgcctctgagggtacctcacccaactgcacaggccattgt
gcccacccccggttgccctgtttccatgggggccgctgcgtggagcgctatagctactac
acatgtgactgtgacctcacagcttttgatggaccatattgcaaccatgatattggtggc
ttctttgagcctggtacctggatgcgctataacctacagtcagcactgcgctccgcagcc
caggagttctcccacatgctgagccggccagtgccaggctatgagcctggctatgtcccc
ggctatgacactcctggctacgtgcctggctaccatggccctgggtaccgcctgcctgat
tacccccgcccgggccggccggtgcccggttaccgtgggcctgtctacaatgttactgga
gaggaagtctccttcagcttcagcaccagctctgcccctgctgtcctgctctacgtcagc
tcctttgtgcgtgactacatggccatactcatcaaggaagatgggaccctgcagctgaga
tatcagctgggcaccagtccttacgtgtaccagctaactacccgaccagttactgatggc
cagccccacagcgtcaatatcaccagggtctaccgcactctcttcatccaggtggactac
ttcccaatgacagaacagaagttctcactgttggtggatagtcagttggattcacccaag
gccttgtatctggggcgtgttatggagacgggagtaattgacccggagatccagcgctac
aacacgccaggtttctcaggctgcctatctggtgttcgattcaacaacgtggctcccctc
aagacccacttccgaactcctcgacccatgactgccgagcttgctgaggccctccgagtt
cagggagaactgtcagaatctaactgtggagccatgccacgccttgtctcagaggtgcca
cctgagcttgatccttggtacctgcccccagacttcccgtactaccatgatgatggatgg
gttgccgtacttttaggatttttggtggcctttctgctgctggggctggtgggaatgttg
gtgctcttctatctgcaaaaacatcgctacaagggctcgtaccacaccaatgagcccaag
gccacccatgattaccaacctggcagcaaacctcccctgcctacatcagactctgtccag
gccccagcccctacaccaggtcccaccccagccccagctccaggccaagctcctgccccc
cgggaccagaacttaccccagatcctggaggaatccaggtctgaatga
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integrated database retrieval system
