Trichechus manatus latirostris (Florida manatee): 105756512
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Entry
105756512 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-C1
KO
K16493
protocadherin alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
105756512
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
105756512
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
105756512
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
105756512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
105756512
NCBI-ProteinID:
XP_012412291
UniProt:
A0A2Y9FYD9
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MVGXGVAALYFWVSCGASAGXLQYSVLEETERGVAVGNVAEDLKLSAAALSLRNFRLXSS
HDEPYFGVDPVSGSLVVREPADRERLCEAKAVCVLTYELHKMGVHVLDAKDNSPLLSAGS
LQPHIPEFLTPEASFTLPXAHDADEGSNGVLSYSLSRSQHFRLEMGARVDGSEYPELVLE
KTLDREQRAPHXARDSGRPARFGDAQVTIIVVDTNNNAPVFERSVYRTKIPETVPNGIVL
FXVQAVYPDEGSNGEIRYSLSNSTXAELRYRFLVHPRSGEVRVTXGPPXTLLEAYNIEAR
DEGTFGLASAAELLVEVTDVNDHAPEMNLMTLSSPVPEDAAPGTEIALLSVRDEDLGPNG
RVTFSMYSGSPFQLKVSFDNYYSLLTDGPLDREQISEYXLLITASDGGLPPLSTRRTLTV
XVAAVNDNTASFPQPQQELFVAENNGPGANLGRVFAQDPDLGKNGLVFYELLDINSEGPS
VSSLVAVESSSGXITAKTSFDFERLRGFSLQVEAREGGIPPRSATLTVNLFVVDRNNNVP
VXLFPVPRNGCVPVEIVPCSARSGHLVTKVVAEDADSGSNAWLSYHVSQASDSSLFRISA
SMRELRTARLVLSTDAVKQRVMVVVWDHGDPPLSFSITVGVLLSNSAPQVLPDLEDPWET
GGQLSAQNLYFVIALACISFLFLGXLLLFLCNKLNQSLGCCSQSRCAVCCCSPEELRNGK
RMTSNPCMTSTTIDVTTIERLSQTYLYRASLGLGSDNNSLLLLGEYSAADLRNLATGVGL
NLLISCIQIRNRKGDHANINAMVSECYGT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctagggggtggcggctctctatttttgggtctcctgcggcgcctcagccggg
tagctgcagtactccgtgttggaggagacggagcggggagtagctgtaggcaatgtcgcc
gaggacttgaaactgtcggcggccgctctgtccttgaggaactttcgcttgncttccagt
cacgatgagccctacttcggagtggacccggtcagcggtagcttggtggtccgagagccg
gcagaccgcgagcggctgtgcgaggccaaagctgtctgcgtcttgacctatgagctgcac
aagatgggcgttcacgtcctggacgccaaggacaactcgcctcttttgtctgctggcagc
ttgcagccccacatccccgagttcctgacacccgaagccagctttactcttccanaagct
catgatgccgacgagggaagcaacggggtgctaagctacagcctcagtcgcagccagcac
ttccgcctggaaatgggggcgcgggtcgacggcagcgaatacccagagttggtgttggag
aaaacgctggatcgcgagcagcgcgccccccacnncgctcgggacagcgggcggcccgcg
cgcttcggagacgcacaagtcaccatcatcgtggtggacaccaacaacaacgcgcctgta
tttgagcgctccgtataccgcacgaagattccagagactgtccccaatgggattgtgttg
ttctgagttcaggccgtctatccggatgagggctccaatggggaaatccggtactcctta
agcaatagcacgtgagcagagctgagataccgttttctcgtgcaccctagaagtggggag
gtgcgtgtcaccnnaggtccaccttaaacgctgttggaggcatacaatatagaggcgagg
gatgaaggcaccttcggtttagctagcgctgctgaactgctggtggaggtaactgacgtg
aacgatcatgcccccgagatgaacctcatgactctatctagcccggttccagaagacgcc
gcacctggcacagagattgctctcctcagtgtaagggatgaggaccttggtcccaatggt
agggtcacttttagcatgtacagcggaagcccttttcagctaaaggtttcttttgacaac
tactacagccttctgactgatgggccgctggaccgggagcaaatcagcgaatactagctc
ctaatcactgcttccgatggtggcttgcccccgcttagcacccgcaggacactcactgtg
taagttgctgctgtgaacgacaatacagcaagctttccccaaccgcaacaggaactcttt
gtggctgaaaacaacgggcccggggccaacctgggccgtgtgtttgcccaggacccggac
ctggggaagaatggccttgtcttctatgagctgttagatattaattctgaaggcccgtca
gtctctagcttggtggcagtggaatcatccagtgggngtatcactgccaaaacttccttt
gacttcgagcggctcagggggttttccttacaggtggaagccagggagggtggcattcct
cccagaagtgcaacactgactgtgaacttgtttgtagtggataggaacaacaatgttcca
gtcnngttgtttcccgtgccaaggaatggctgtgtaccagtggaaattgtgccctgctct
gctagaagtggacacttggtcacaaaagtggtagcagaggatgcagacagtggctccaat
gcctggctttcctaccatgtctctcaggcttctgattctagccttttcagaatttcagcc
agtatgcgagagctgcggacagctcggttagttctttccactgatgcagttaagcagaga
gtgatggtagtggtttgggaccatggagacccaccactttccttttccatcactgtgggt
gtgctgttgagcaactctgcccctcaagtccttccagacttggaagatccctgggaaaca
ggagggcagctttctgcccagaacttgtattttgtcattgctctggcctgtatttccttt
ttatttctggggntcttacttttattcctgtgcaacaagttgaaccagagcctaggttgt
tgctctcagagccgctgtgcagtttgctgttgctctccagaggaactgaggaatggaaag
aggatgacttcaaatccttgcatgacatcaacaacaatagatgttaccacaatcgagaga
ctgtctcagacctatctctatcgggcctctttgggacttggttctgataacaacagtttg
ctgttgcttggggaatacagtgctgctgacctgagaaatctggccactggagtaggattg
aatttgctgatatcttgtattcagattcggaataggaaaggagatcatgcaaatatcaat
gccatggtaagcgaatgttatgggacttga
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