Trichechus manatus latirostris (Florida manatee): 105756516
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Entry
105756516 CDS
T05135
Name
(RefSeq) protocadherin gamma-A6-like
KO
K16495
protocadherin gamma subfamily A
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
105756516
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
105756516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
RET_CLD1
TMEM154
Motif
Other DBs
NCBI-GeneID:
105756516
NCBI-ProteinID:
XP_023591398
UniProt:
A0A2Y9RIJ6
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MAVLQRSRRRHRSGLVLLFTFLETLWGARAGQMRYSIPEELEKGSFVGNITKDLGLEPWE
LAEHGVRLVSRGRTQLFTLNPRSGSLITAGRIDREELCAQSVRCLVNFNILVEDKMNLYP
VEVEIMDINDNTPQFLAEELEVKILENAPPSSRFPLMEVYDLDVGMNSLQGFKLSSNSHF
SVDVQSEANGPKYPELVLERALDREREAVHHLVVTAVDGGDPVRSGVARIQITVLDANDN
APVFTKPVYRVSVPENLPVGTPVLSVNATDRDEGVHAEVTYSLVKITKKISQIFCLNALT
GEISTSGDLDYEDSSSYELDVEAQDRPGLRDRAKVFITILDVNDNVPEVVVTSGSRTIAE
NAPPGTVVALFQVHDRDAGLNGLVTCSISRSLPFELEKSVDNYYRLVTSTVLDREQVSSY
NITVTTTDKGTPPLSTETLISLNVADTNDNPPTFSHTSYSVYVPENNPRGASIFSVTTHD
PDSDENARVTYSLAEDTIQGAPLSAYVSINSDTGVLYALRAFDYEQFQSLQLRVTARDSG
DPPLSSNVSLSLFILDKNDNAPEILYPTLPSDDSTGVELAPRSAEPGYLVTKVVAVDCDS
GQNAWLSYRLLKASEPGLFAVGVHTGEVRTARALQDRDALKQSLVVAVQDHGQPPLSATV
TLTVAVADSIPDVLADLSSLESPDNTDDSGLTLYLVVAVAAVSCVFLAFVVVLLALRLRR
WRTKRLLQASGGVLPSLPVSQFVGVDGVRAFLQTYSHEVSLTADSGKSHIIFPQPNYTDT
LISAESCGKSEPLLIQEDLGFCKEEDSFVQVRFLLFYWFHLNRKF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggttctgcagaggagccggcgccggcaccgcagcggactggtcttgctcttcacc
ttcctggagacgctgtggggcgccagggcggggcagatgcgctactccattcccgaggag
ctggagaaaggctccttcgtggggaacatcaccaaagacctggggctggagccctgggaa
ctggcggagcacggagtccgcctcgtctccagaggcaggacgcagctctttactctgaac
ccgcgaagcggcagcttaatcactgcgggcaggatagaccgggaggagctctgcgctcag
agcgtgcggtgtctggtgaattttaacatccttgttgaggataaaatgaatctttatcct
gtggaagtggaaataatggatattaatgacaatacaccccaattcttagcggaagaactg
gaagtgaaaattctcgaaaacgcacctccttcctctcgttttccattgatggaggtctat
gacctggatgtgggaatgaactcgcttcagggcttcaagctcagctccaacagtcacttc
tcagtggacgtgcaaagcgaagccaacgggcccaagtacccggagctggtgctggagcgt
gccctggaccgggagcgagaggccgttcaccacctcgtcgttactgccgtggatggaggt
gaccctgttcgctcaggtgtggctcgaattcagattactgtcctagatgcgaatgacaac
gctccggtgtttacaaagcctgtctaccgggtgagtgttcctgaaaacctgccagtaggt
acgccagtgttgtccgtaaatgccaccgaccgggatgaaggagtccacgcggaagtaacg
tattccttagtgaagataactaaaaagatttcacagattttctgcttgaatgctttgact
ggagaaatttcaacttctggagatctagactatgaggactcgagctcctatgagctggat
gttgaagcccaggataggccaggtcttcgagatagagctaaagtcttcataactatcttg
gatgtaaatgataatgtaccagaagtggtagttacatctgggagcagaacaattgctgaa
aatgcgcccccaggaacagtagttgctctttttcaagtgcatgatcgagatgcaggactg
aatggtctggtgacatgctccatctccagaagtctgccgtttgaattggaaaaatcagta
gacaattactatcgattagtgacaagcacagtcctagaccgtgagcaggtgtcctcgtac
aacatcactgtgacaaccacagacaaaggaactccgcccctgtctacagaaacgctcatc
tccctaaatgtggcagacaccaacgacaacccgcctaccttttctcacacatcctactcg
gtctacgtccctgagaacaaccccagaggagcctctatcttctcggtgaccacccatgat
cccgacagcgatgagaatgcccgagttacttactccctggctgaggacaccatccagggg
gcacccctatccgcctatgtctccattaactctgataccggagtcctgtacgcactgcga
gcctttgattatgagcagtttcaaagcctgcaactgagagtgactgcacgtgacagcggt
gacccgccactcagcagcaacgtgtcgctgagcctgttcattctggacaagaacgacaat
gcaccagaaatcctgtaccctacccttcccagtgacgattccacaggcgtagagctggcg
ccgcgctcggcagagcccggctacctggtgaccaaggtagtggcggtggattgcgactca
ggacagaacgcctggctgtcctaccgcctgctcaaggccagcgagccagggctcttcgcg
gtgggagtgcacacgggtgaggtacgcacggcgcgggccctgcaggacagagacgcgctc
aagcagagcctggtggtggccgtccaggaccacggtcagccccctctctcagccacagtc
acgctcactgtggccgtggctgacagcatccccgacgtcctggccgacctgagcagttta
gagtctcctgacaacacggatgactcaggtctcacgctgtacctggtggtggcggtggcc
gcggtctcctgcgtcttcctcgcctttgtcgtcgtgctgctggcgctcaggctgcgtcgc
tggcgcacgaagcgtctgctccaggcttcgggaggggtgttgccgagcctgccggtctca
cagtttgtgggtgtggatggggttcgagctttcctgcagacctattcccacgaggtctcc
ctcaccgcggactccgggaagagccacattatcttccctcaacccaactatactgacaca
ctcattagtgcagagagttgtgggaaaagcgagcctcttttgatccaggaagatttaggt
ttttgtaaagaggaagactcttttgttcaggtaaggtttttgcttttttattggtttcat
ttgaacaggaaattctaa
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