Trichechus manatus latirostris (Florida manatee): 105756517
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Entry
105756517 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-B4-like
KO
K16496
protocadherin gamma subfamily B
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
105756517
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
105756517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Sde0182_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
105756517
NCBI-ProteinID:
XP_023591400
UniProt:
A0A2Y9R7H4
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MGSGAGEWGWAERRRVLFPFLLSLFCPALSEQIRYRIPEEMSKGSVVGNLAKDLGLSVHE
LPTRKLRVSSEKPYFAVSSESGELLVSSRLDREQICGKKPVCALEFEAVAENPLNFYHVN
VEIEDVNDHTPKFTQTAFELQISESTKPGARFILGSAHDADIGTNSLQNYQLSPNDHFSL
LNKEKLDGGKHPELVLKMPLDREEQKSYHLILTALDGGDPPLSSTAQIQVLVTDANDNPP
VFSQDIYRVGLRENVSPGTTVLRVMATDQDEGVNAEITFSFSEADQITQFDVDSSTGAIT
ILNTLDFEEVKEYSMILEARDGGGMIAQCTVEIEVLDENDNVPEVVIQSLPDLIMEDTEL
GTYIALFKVRDKDSGDNGEVTCKLEGDVPFKILASSKNTYKLVTDGVLDREQTPEYNVTI
TATDKGKPPLSSSVSVTLHIGDVNDNAPVFHQASYAVHVAENNPPGASIAQVSASDPDLG
PNGLLSYAIVASDLEPRALSSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQAXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKVVAVDADSGHNAWLSYHVLQA
SEPGLFSLGMRTGEVRTARALGDRDAARQRLLVSVCDGGKPPLSATATLHLVFADSLQEA
LPDLSDRSAPSDPQAELQFYLVLALALISVLFLLAVILAIALRLRCSSSPTTWDCFQPGL
CSKSGPEVLPNYSDGTLPYSYNLCVAQTGKTEFNFLKCNEQLNAGQDILCGDSSGALFPL
CNPNESTSQLVSFLKAHLAIFTGLIGHI
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggcgctggggagtggggctgggctgagaggcggcgagtgctctttcccttc
ctgctgtctttgttctgcccggcgctctctgagcagatccgctacaggattcccgaggaa
atgtccaagggctcggtggtggggaacctggccaaggacctagggctcagtgtccacgag
ttaccgactcgaaaactgcgagtcagttcggagaagccttactttgctgtgagctcagag
agtggagagttacttgtgagcagcaggctagacagggagcagatatgcgggaagaagcca
gtgtgtgctctggaatttgaagctgttgctgaaaatccgttgaacttttatcacgtgaat
gtggagatcgaggatgtcaatgaccacacgccaaaattcacgcaaactgcttttgaactt
caaataagcgagtccacaaagcctggagcacgatttatcttaggatctgcccatgatgca
gatattggtactaactctctacaaaattatcagctcagccccaatgatcatttctcactc
ctgaataaagagaaattagatggaggtaaacaccctgagctagtactgaagatgccttta
gatcgggaagagcagaaatcctaccacctgatcttgactgctttggatggtggggatcca
cccctaagcagcactgcacagatacaggtccttgtgactgacgccaatgataacccccca
gtgtttagccaagacatatatagggtgggtcttcgggaaaacgtgtccccgggcaccact
gtgcttcgggtgatggccaccgatcaggacgagggtgtcaatgcagagatcaccttctct
ttcagcgaagctgaccaaatcacccagtttgatgtggattcaagtaccggggcaattact
attctaaatacgttagattttgaagaagtcaaagaatattccatgattttggaagcaagg
gatggtggaggaatgattgcacaatgtacggtagaaatagaagtcctagatgaaaatgac
aacgtcccagaagtggtaatccaatccctacctgacttaattatggaggacaccgagctg
ggaacatatattgctcttttcaaagtccgtgacaaggattctggagataacggagaagtt
acttgtaaattagaaggtgacgttccatttaaaatactcgcttcttcaaaaaacacgtat
aaattagtgacagatggggttttagacagggagcagaccccggagtacaacgtcaccatt
acagccacagacaagggcaagcctccactctcctccagcgtaagcgtcaccttgcacatc
ggcgacgtaaatgacaacgctcccgtgttccaccaggcctcgtacgcagtccacgtggct
gagaacaaccctcctggcgcctctatcgctcaagttagcgcctctgaccccgacttgggg
cccaatggcctgttgtcttacgccatcgtggccagtgacctggaaccgcgagcgctgtcg
tcctacgtgtctgtgagcgcacagagcggggtggtgttcgcgcagcgcgccttcgaccac
gagcagctgcgcgccttcgagctgacgctgcaggcnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtcaccaaggtg
gtggcggtggacgcagactcgggacacaacgcctggctgtcctaccacgtgctgcaggcc
agcgagcccgggctcttcagcctcgggatgcgcacgggcgaggtgcgcacggcgcgtgcc
ttgggcgacagggacgcggcccgccagcgccttctggtctctgtatgcgatggaggaaag
ccacctctctcggccactgccacgctgcacctggtctttgcagacagcctgcaggaggcg
ctgccagacctcagcgaccgctccgcaccctctgatccccaggccgagctgcagttttac
ctggtcttggctttggccttgatctctgtgctctttctccttgccgtgattctagccatt
gccctgcgcctgcgatgctcctccagccccaccacctgggactgttttcagcctggtctt
tgttccaagtctggacctgaggtgctccccaactacagcgacgggactttgccctattcg
tacaatctgtgtgttgcacagacaggaaagaccgaatttaatttcctgaaatgtaatgag
caactgaatgcaggacaagacatactctgtggtgattcatctggagctttatttccactg
tgtaatcccaatgagtcaacttctcagctggtgagtttccttaaagcacatcttgctata
ttcacaggattaataggccatatttga
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