Trichechus manatus latirostris (Florida manatee): 105756520
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Entry
105756520 CDS
T05135
Name
(RefSeq) protocadherin gamma-B6-like
KO
K16496
protocadherin gamma subfamily B
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
105756520
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
105756520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
105756520
NCBI-ProteinID:
XP_012412299
UniProt:
A0A2Y9FY50
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MLLQGRRGLQFLQLSRNAGARRELERGMGGSCAQRRSAGLRQVLFAFLLPLLCPALCEPI
RYAIPEELAKGSVVGNLARDLGLSVLDVSARKLRVSAEKPHFNVDLESGDLLVKDRIDRE
EICRERRICELQLEAVVENPLNIFHVIVVVEDINDHAPQFDEKDIHLEIFESVSAGARIS
LDPATDPDINTNSVKDYRINSNPYFSLLVRVNSDGGKYPELSLEKPLDREEQRSHHLILT
ALDGGDPPRSATANIEIFVRDTNDNPPVFSKDEYRISLSENLPPGTSVFRVSATDQDEGI
NAEISYYFRSTTQSARHMFSVDEKTGMIKNIQSLHFEDVERYTMEVEAKDGGGLSTQCKV
IIEILDENDNSPEIIITSLSDYILENSLPGMVVALIKTRDRDSGENGEVMCSIGKGVPFK
IRSSSTNYYKLVTDGTLDREQTPEYNITITATDKGKPPLSYSKSITLHITDINDNAPVFH
QASYVVHVAENNPPGASITHVSASDLDLGTNCQVSYSIVGSDLEPQALSSYVSVNALSGV
VSAQRAFDHEQLRAFELTLQARDQGSPPLSANVSLRVLVDDRNDNAPRVLYPALGPDGSA
LFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGELRTARTLG
DRDASRQRLLVAVRDGGQPPLSATATLLLVFSDSLQEALPDLSNRPEPSHPQAELQFYLV
VALALISALFLLAVILAIALRLRHSSSPAPWNCFQPGFCSESGPVVPPDYSEGTLPYSYN
LCVAQTGKTEFNFLKCAEPLHSKQDIVYGDSAGDLFPLYCGDDLTSHPKTLTPVSFIFVS
SLIC
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgcagggacgccggggattgcagtttcttcagctttccagaaacgcgggggcc
aggagagaactggagcgcggaatgggagggagctgcgcgcagaggcgctcggccggcctg
cggcaggtactgtttgccttcctgctgcctttgctctgccccgcgctctgcgagccgatc
cgctacgcgattcctgaggagctggccaagggctcggtggtggggaacctcgccagagac
ctagggctcagcgtcctggatgtgtcggctcggaaactacgagttagcgctgagaagccg
catttcaacgtagacttagagagtggggacttgcttgtgaaggaccggatagatcgtgaa
gagatatgcagagagagaagaatatgtgagttgcagttggaagccgtggtggaaaatcct
ttaaatatttttcatgtcattgtggttgttgaggatattaatgaccacgcccctcaattc
gatgaaaaggacatacatttagaaatttttgaatctgtatcggctggtgcacgaatatct
cttgaccctgccacagaccccgatataaatacgaactcagttaaagattatcggataaac
tctaatccttatttctcattattggttagagttaattccgatggtggtaaatacccagag
ttatctctggagaaacctctagaccgagaagagcagaggtctcatcacttgatactgact
gccttggatggaggggacccaccccgtagtgccacagcgaacatagaaatctttgtcagg
gacaccaacgataaccccccggtgttcagtaaagacgaatatagaatcagtcttagtgaa
aacctacctccagggacttctgtgtttcgggtgtcagccactgaccaggacgaggggatc
aatgctgaaataagctactacttccggagcactactcagagcgcaaggcacatgttctca
gtggatgagaaaacaggtatgattaagaatatccagtctttgcattttgaggatgtggaa
agatacaccatggaagtggaagccaaggacggaggtggactctccactcaatgtaaagta
atcatagaaatcctagacgaaaatgacaacagcccagaaataatcatcacctctctctct
gattacattttggagaattctcttcctggaatggttgttgccctcatcaaaacacgggac
cgggattctggggaaaacggagaagtcatgtgtagtataggaaaaggcgttcctttcaag
attcgttcttcttctacaaattactacaagctggtgacagatgggaccctggaccgagag
cagactccagaatacaacatcaccattacagcaaccgacaaaggcaagccacccctctcc
tacagtaaaagtatcaccctgcacatcaccgacatcaatgacaacgcgccagttttccac
caagcctcctatgtcgtgcatgtggctgagaacaacccgcctggagcttccataacacac
gtcagtgcctccgatctggacttgggaaccaactgccaagtgtcctactccatcgtgggc
agtgatctggagccgcaggccctgtcgtcctacgtgtctgtgaacgcgctgagcggcgtg
gtgtcggcgcagcgcgccttcgaccacgagcagctgcgcgccttcgagctgacgctgcag
gcgcgtgaccagggctcgcccccgctcagcgccaacgtcagcctgcgcgtgctggtggac
gaccgcaacgacaacgcgcccagggtgctgtacccggcactgggacccgacggctcagcg
ctcttcgacacagtgccgcgcgcagcgcagccgggctacctggtcactaaggtggtggcc
gtggacgcggactctgggcacaatgcctggctgtcctaccacgtgctgcaggccagtgat
cccgggctcttcagcctggggctgcgcacgggcgaactgcgcacagcacgcaccttaggc
gatagggacgcgtcccgccagcgcctgctggtcgcagtgcgtgacggagggcaaccgccc
ctctcagccactgccacgctgctccttgtgttctcagacagcctgcaggaggcgctgccg
gacctcagcaaccgtccggagccctctcacccccaggcagagctgcagttttatctggtg
gtggccttggccttgatctccgcgctcttcctcctcgcggtgattctggccattgccctg
cgcctgagacactcctccagccccgccccctggaactgctttcagccgggtttctgctcc
gagtctggacccgtggttcccccagactacagcgagggaactttgccctattcctacaat
ctgtgtgttgcgcagacgggaaagacagagtttaatttcctaaaatgtgctgagcccttg
cattccaaacaagacatagtttacggtgattctgctggggacttatttccactttactgt
ggggatgatttgacttcacatcccaagactctaacaccggtgagtttcatttttgtgtct
tctctaatctgctag
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