Trichechus manatus latirostris (Florida manatee): 105756523
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Entry
105756523 CDS
T05135
Name
(RefSeq) protocadherin gamma-A11-like isoform X1
KO
K16495
protocadherin gamma subfamily A
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
105756523
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
105756523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
105756523
NCBI-ProteinID:
XP_023591394
UniProt:
A0A2Y9RHF0
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MQKQTDARNRGILGSDTAMVDRLPRLDRGGLVLLCIFLGTLRESRAGQIRYSVPEETDKG
FFVGNISKDLGLEPRELAERGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCEMVSAC
LLNMEILAEDILKIYGVEVEIMDINDNAPSFREEEVEIKISEHATPGLRFPLPNAKDPDV
GVNSLQSYQLSPNSYFSLHVRGGSDGVKNPELVLEQALDREKEAAHLLLLTALDGGDPIR
KGAVPIRVVVLDVNDHIPKFTQSVYRVSVPENLSSGTRVLVVNATDPDEGVNGEVMYSFR
NTESKVSEIFQLDSRTGEVLIRGSLDYEKYRFYEMEIQGQDGGGLVTIAKLLITVVDVND
NAPEITITSSTNSVLENSPPGTVIALLNVQDQDSEENGQVSCFIPKNLPFKLEKTYGNYY
KLITSKALDREQVQSYNITMTATDQGSPPLSTETHISLNVADDNDNAPAFLHSTYSAYIP
ENNPRGSSIFSVTAHDPDSKENARVIYFLAEDTIQGAPLSSYISINSDTGVLFALRSFDY
EQFHDLQLWVTARDSGYPPLSSNVSLSLFVLDQNDNAPEILYPALPSDGSTGVELAPRSA
EPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGVHTGEVRTARALQDRDALKQSL
VVAVQDHGQPPLSATVTLTVAVTDSIPDVLADLGSLESPANPDDSGLTLYLVVAVTTVSC
VFLAFVLVLLALRLRRWHSSRLLQAPGEALTGAPASHFVGVDRVQAFLQTYSHEVSLTAD
SRKSHLIFPQPNYADTLISQESYEKSEPLLVAEDLATGLGKSDPTNNQVRFISLSPKCWR
LGTSLSISFFLILL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacaaactgacgcaagaaaccgcggaatattgggctcagacactgccatggtt
gatcggcttccgcgcctggaccgcggcggactggtcctgctgtgcattttcctggggaca
ctgcgggagtcccgggcaggacagatccgctactccgtacccgaagagacggacaaaggt
ttctttgtgggcaacatctccaaggacctggggctggagcccagggagctggcggagcgc
ggagtccgcatcgtctccagaggtaggacgcagcttttcgctctgaacccgcgaagcggc
agcttgatcacagcaggcaggatagaccgggaggagctctgtgagatggtttccgcctgt
cttttaaatatggagattcttgcggaagacatcttgaagatttatggagtggaggtagaa
ataatggatattaatgataacgcccccagcttccgggaagaggaagtagagataaaaatc
agtgagcacgcaactccgggattgcgattcccccttcctaatgctaaggatccagatgtg
ggcgtgaactccctccagagctaccagctcagccctaatagttacttctccttgcacgtg
cgaggcggaagcgatggagtcaagaatccagagctagtgctggaacaggctctggaccga
gagaaagaggctgctcacctcctcctccttacagctttagatggaggcgatcccatccgc
aagggcgctgttcccattcgggtggtggtcctcgacgtaaatgaccacatcccaaagttt
acacagtctgtgtatcgagtgagtgttcctgagaacctcagctccggaactcgggtgctc
gtggtaaacgcaacggatccagacgaaggagtcaatggggaagtgatgtattcattccgg
aatacagaaagcaaagtttcggaaatattccagttggattctcgaactggagaagtccta
atacgagggtctctggattatgagaaatatagattctatgagatggaaattcaaggccaa
gatggtggaggtctggtgaccatcgctaagctgttgatcactgttgtagatgtaaatgat
aatgctccagaaataactattacctcttctactaattcagtgctggaaaactctcctcca
ggtacggtaattgctcttcttaacgtgcaagatcaagactctgaagaaaatggtcaggtc
tcctgtttcattcctaaaaatttgccttttaagttagaaaagacttacggaaattactac
aagttgataacaagcaaagcactggacagggagcaggtccagagctacaatataacgatg
acagccacagaccagggaagtccgcctttgtctacagaaactcacatctcgttgaatgtg
gccgatgacaacgataacgcgcctgctttccttcactccacttactcagcctacattcct
gaaaacaatcctagaggctcttccatcttctcagtgacagcccacgacccggacagcaaa
gagaacgcccgagttatttactttctggccgaggacaccatccagggggcgcctctgtct
tcctacatttccatcaattccgacactggagtcctgttcgcactgcgttccttcgactat
gagcagttccacgacctgcagttgtgggtgacggcacgcgacagcgggtacccgccgctc
agcagcaacgtgtcactaagcctgttcgtgctggaccagaacgacaacgcaccggagatc
ttgtaccccgcccttcctagcgacggctccactggagtggagttggcgccccgctctgca
gagcccggctacttggtgaccaaagtggtggctgttgaccgtgactcaggtcagaacgcc
tggttgtcctaccgcctgctcaaggccagcgagccagggctcttcgcggtgggagtgcac
acgggcgaggtacgcacggcgcgggccctgcaggacagagacgcgctcaagcagagcctc
gtggtggccgtccaggaccacggccagccccctctctcggccaccgtcacgctcaccgtg
gccgtgaccgacagcatccccgatgtgctggccgatctgggcagcctagagtctcccgcc
aaccctgacgactccggactcacgctgtacctggtggtggctgtgaccacggtttcctgc
gtcttcctcgcctttgtcctcgtgctgctggcgctcaggctgaggcgctggcactcatcg
cgcctgctccaggctccgggagaagcgttgactggcgcgcctgcctcgcactttgtgggt
gtggaccgggtgcaggccttcctgcagacctattctcacgaggtctccctcaccgcggac
tcgcggaagagtcacctgatcttccctcagcccaactacgctgatacgctcatcagccag
gagagctatgagaaaagcgagccactcttggtagctgaagacttagctaccggtttaggc
aaaagcgatccaacgaataatcaggtgagatttatttccctgtctcccaagtgctggcgt
cttggcacaagtctttcaattagcttttttctgatcctgttatga
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