Trichechus manatus latirostris (Florida manatee): 105756528
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Entry
105756528 CDS
T05135
Name
(RefSeq) protocadherin gamma-A4
KO
K16495
protocadherin gamma subfamily A
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
105756528
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
105756528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
105756528
NCBI-ProteinID:
XP_012412342
UniProt:
A0A2Y9FY62
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MAAPPYRPGCSRLVRICLLLGALWEIRAEQIRYSVLEELDKGSFVGNIAKDLGLESRELT
ERGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCDRSPKCVANLEILLEDKVKIFGVE
VEIIDVNDNAPSFGTQEREIKVVENENPGTRFPLPEAFDPDVGVNSLQSYQLNSNGHFSL
DVQSGADGIKYPELVLERALDREEEAVHHLVLTASDGGKPVRSGTARILVKLIDTNDNAP
VFSQPEYHVSVRENIPVGTLLLTVEATDPDEGANGEVTYSFRKVREKISQLFQLNSLTGD
IAILGDLDYEDSEFYDIDVEAHDGPGLRARSKVLVTVLDVNDNTPEVTVTSLISSIQETS
SPGTIIALFNVHDGDSGENGLVTCSLPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI
TVTATDQGTPPLSTETRISLQVADINDNPPSFARASYSAYIPENNPRAASFFCLTAQDPD
SGENARVTYSLAEDTLQGTPLSSYISINSDTGVLYALRSFDYEQFRDLQLWVTASDSGDP
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFAVGVHTGEVRTARALQDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADSIPDVLADLGSIKTPSDPEDSGLTLYLVVAVAAVSCVFLAFVSVLLALRLRRWH
TSRLLQASDGGLAGMSASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
SAESSEKREPLLITQDLLETKGDPSQVS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctccttatcgcccaggctgcagcaggctggtccggatctgccttctcctg
ggggccctgtgggaaatccgagccgaacagattcgctactcggtgcttgaagagctggac
aaaggctctttcgtgggcaacatcgccaaagacctggggctggagtcccgggagctgacg
gagcgcggagtgcgcatcgtctccagaggtaggacccagctctttgctctgaacccgcga
agcggcagcttgatcacggcgggcaggatagaccgggaggagctctgtgacagatctcca
aagtgtgtagcaaacttggagattctcctagaggacaaagtgaagatttttggagtagaa
gtggaaataatcgatgttaatgataacgcgcccagctttgggacccaggaaagagaaata
aaagtcgttgaaaatgaaaatcctgggacaagatttcctcttcctgaagcttttgatccg
gatgtaggggtaaactccctgcagagttaccagctaaactcgaatggtcacttctcgctg
gacgtgcaaagcggagccgatgggattaagtacccggagctggtgctggagcgcgccctg
gaccgcgaggaagaagcggtgcaccacctcgtcctcaccgcctcagacgggggcaagccg
gttcgctctggcactgccaggattctcgtgaaacttatcgataccaacgacaatgctccc
gtattcagtcaacccgagtaccacgtaagtgttcgcgaaaacataccagtgggcacactg
ctactcacggtagaagccactgatccagacgaaggggccaatggagaagtgacatattct
ttccggaaagtgagagagaaaatatcccagctcttccagttgaattctctgaccggggac
atagcaatattgggggatctagattacgaggactctgaattctatgacatagatgtagaa
gcccatgatggacctggtctccgagccagaagcaaagtactggtgacagttttggatgta
aacgacaacactccagaagtcacggttacatccctcattagctcaatccaagaaacttct
tccccaggcacaattattgcacttttcaatgtgcatgatggtgactcaggagagaatggc
cttgtaacatgttcacttccagataatctgccattcacacttgaaaagacctatggaaat
tattatcgtttgttgacgcaccgaactctggacagggaagaagtctcagaatataacatc
acggtaactgccactgaccagggaactccaccgctgtctacagaaactcgtatctcgctg
caggtggcagacatcaatgataatccaccctctttcgctcgtgcctcctactctgcctac
attccagaaaacaaccccagagctgcctccttcttctgcttgaccgcccaggaccccgac
agcggcgagaacgcccgagtcacttactctctggccgaggacaccctccagggtacacct
ctgtcttcctacatctccatcaactccgacaccggggtcctgtatgcccttcgctccttc
gactatgagcagtttcgggacttacagctatgggtgactgccagcgacagcggggatccg
ccgcttagtagcaatgtgtcattaagcctgttcgtgctggaccagaatgacaatgcgccc
gagatcctgtacccggctcttcccaccgacggatccactggagtggagctggctccccgc
tctgcagagcccggctacttggtgaccaaggtggtggctgtggaccgcgactcaggacag
aacgcctggctgtcctaccgcctgctcaaggccagcgagccagggctcttcgcggtgggg
gtgcacacgggcgaggtgcgcacggcacgggccctgcaggacagagacgcactcaagcag
agccttgtggtggccgttcaggaccacggccagccccctctctcggccacggtcacgctc
accgtggccgtggccgacagcatccccgatgtcctagccgacttgggcagcatcaagacg
ccctctgacccagaagattcaggcctcacgctgtacctggtagtggccgtggccgccgtc
tcgtgtgtcttcctcgcctttgtcagcgtgctgttggcgctcaggctgcggcgctggcac
acgtcgcgtctgctccaggcttcagacggcgggctggcgggcatgtccgcctctcacttt
gtgggcgtggacggggtgcgcgccttcctgcagacctattcccacgaggtctccctcacc
gcagactctcggaagagtcacttgatcttcccccagcccaactacgctgatacactcatt
agtgcagagagcagtgagaaaagagaacctcttctgataactcaggatttacttgaaaca
aaaggagaccccagtcaggtgagttga
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