Thermotoga neapolitana: CTN_1021
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Entry
CTN_1021 CDS
T00847
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tna
Thermotoga neapolitana
Pathway
tna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTN_1021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tna03021
]
CTN_1021
03400 DNA repair and recombination proteins [BR:
tna03400
]
CTN_1021
Enzymes [BR:
tna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTN_1021
Transcription machinery [BR:
tna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CTN_1021
DNA repair and recombination proteins [BR:
tna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CTN_1021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACM23197
UniProt:
B9K8B4
LinkDB
All DBs
Position
996228..997250
Genome browser
AA seq
340 aa
AA seq
DB search
MMKMVEFVMPKKLKVEEEREEKDYYYTRFSLSPLERGYAITIGNALRRVLLSSIPSLAIV
GVRFIKPEKYHEYDYIEGVKEDILDIILNLKKVQFRVNVTVKDRIKMEVEKKGPGELVAG
DIKTPAGIEVANPDLHIATLNSKADLFFEIYAEVGKGFVPVSERDERPEVGWIPIDGVFS
PVMKVNFLTENVRVGKRTDYDKLILEVWTKKSIRPEEALRKAADILINHFRIVMEGLPEM
KISEEYIITEEDEEEALTAVEGEDQESVENLDVYSKKIDELELSVRSLNCLKRAKIETIG
DLMSKTEDELLKIKNFGQKSLDEVKKKLKEKFGLELRKGE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaaaatggtagagtttgtaatgccgaagaagttgaaggtggaagaagagcgggaa
gaaaaagattattactacaccaggttctcgctttctccacttgagagagggtacgccatt
accataggaaacgcattgaggagggttcttctttcttccataccctcccttgcaatcgtc
ggagtaaggtttataaagcctgaaaaatatcacgagtacgattacatcgaaggagtaaag
gaggatatactcgatatcatattgaacctgaaaaaggttcagttccgtgtgaacgtgacc
gtcaaggacagaatcaaaatggaagtggaaaagaaaggtccaggagaactcgtggccggt
gacataaagacacccgccggtatagaggtggcgaatccagacctccacatagcaactttg
aattcgaaggcagatctcttttttgaaatctacgctgaggtcggaaaaggcttcgttccg
gtctcagaaagggatgaaaggcctgaagtgggatggataccgatcgatggtgtcttcagt
ccggttatgaaagtgaatttcttaacggagaatgtgcgtgtgggaaagaggacggactac
gacaaactcatactcgaagtgtggacgaaaaagtcgataagacccgaagaagcgttacgg
aaagcagccgacattttgataaaccacttcaggatcgttatggaaggccttccggaaatg
aagatatccgaagagtacataatcacggaagaggatgaggaagaagccttgaccgctgtc
gagggcgaggatcaggaaagcgtcgaaaacctcgatgtgtacagcaagaaaatagacgaa
cttgagctgtctgtcagatctctgaactgcctcaagagggcaaagatagaaacaataggc
gatttgatgagcaagacagaggatgaactcttgaagatcaaaaacttcggtcagaagtct
cttgatgaggttaaaaagaagttaaaggaaaaattcggactcgagctcaggaagggggaa
tga
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