Thermotoga neapolitana: CTN_1923
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Entry
CTN_1923 CDS
T00847
Name
(GenBank) Hydrolase of the metallo-beta-lactamase superfamily-like protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tna
Thermotoga neapolitana
Pathway
tna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTN_1923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tna03019
]
CTN_1923
Messenger RNA biogenesis [BR:
tna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CTN_1923
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ACM24099
UniProt:
B9KAW6
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Position
1872467..1873975
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AA seq
502 aa
AA seq
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MVDSENDAFLLDFGLNFSRWGEFFEEFLNPRTGRILHDLLKLNMVPRLNIYREDLFDGKF
EDPVNYSFLFLSHAHADHTGMVGLIDEKIPLLMTGETLAVMNASVKTTNSNVLIQLDGKK
RRKASEKDVENGIRPDLTVSGRSKDTEELERCISFPEKTELDDYRTVEMSTLWKDDLFVE
PVYHSVIGAAGLVVKVDGFWLAYTGDFRTGPETPEEERYWLDTLGEKRLSLSLRTFQFFE
KLKDKRPIVLIVEGTRLAREENVENTEKDVYENATKVFRKTKNLILVDFPVRHLERLFTF
LKVCMENNRKLVLMPKDYAYLIEMERVEPLWKLSEEEKSHIRVYHPGKLTYINLEKEALI
KAKSEGILIPPNEINYSPGEYTLVAGYWDFPHILDLDENVLNGAIYIHSTSEAYTEEQEI
DARRFMNWLRYFNIKPFGLKERNGSVVFTKEFHASGHVSPRSLEAILNDLKPDYIVPVHT
LNPNWFVERWKERVLLNDVIVL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtggttgactctgaaaacgacgccttccttctcgatttcggtctcaacttctccagatgg
ggggagttcttcgaagagttcctgaacccaagaacagggaggatcctccacgaccttttg
aaactcaacatggttccccgtctgaacatctacagagaagacctcttcgatggaaagttc
gaagacccggtgaattactcctttcttttcctgagccacgcccacgcagaccacaccgga
atggtcggtctcatagatgaaaagatcccccttctcatgactggtgaaactcttgctgtg
atgaacgcaagtgtgaagacaaccaactcgaacgttctcatccagctcgatggaaaaaag
agaagaaaagcatcagaaaaagacgtggaaaacggtatcagacctgatctcacggtgagc
ggaagatcgaaagacacagaggaacttgaaaggtgcatctcctttccggaaaagacagaa
ctcgatgactacagaacggttgagatgagtactctctggaaggacgacctcttcgtcgag
cccgtctatcactccgtgatcggtgcagccggtcttgtggtgaaggtggatgggttctgg
ctcgcctacaccggtgacttcagaacgggcccggagacaccagaggaagaacgttactgg
ctggacacactgggcgaaaagagactatcactttctcttcgaacgtttcagttttttgaa
aaactgaaggacaagcgccccatcgtcctcatcgtcgaaggaacaagactggcaagagaa
gagaacgtggaaaacacagaaaaagacgtctacgaaaacgcaacgaaggtcttcagaaag
acaaaaaacctgatactcgttgacttcccagttagacacctcgaaaggctcttcaccttc
ctgaaagtctgcatggaaaacaacagaaaactcgttctcatgccaaaagactacgcctat
ctcatcgaaatggaacgcgtggagccactctggaaactttccgaagaagagaaaagccac
atcagggtgtatcaccccggaaaactgacctacataaacctggaaaaagaggcactcatc
aaagcaaagagtgagggtatcctcatacctcccaatgagataaactactcccccggagag
tacacactggttgcaggctactgggactttccacacatcctcgatctcgacgagaacgtt
ttgaacggtgccatctacattcactccaccagcgaggcctacacggaagagcaggaaatc
gatgcaaggcgcttcatgaactggctcagatacttcaacataaaaccgttcggcctgaag
gagcgaaacggaagtgtggtcttcacaaaagagttccacgcctcgggccacgtttcaccg
agaagcctcgaggcgatcctgaacgatctgaaaccagactacatcgtacccgttcacacg
ctgaacccgaactggttcgtcgaacgctggaaagagagagtccttctgaatgatgtgatt
gtgctataa
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