Pyrobaculum neutrophilum: Tneu_0740
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Entry
Tneu_0740 CDS
T00682
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
tne
Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tne02048
]
Tneu_0740
Enzymes [BR:
tne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
Tneu_0740
Prokaryotic defense system [BR:
tne02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Tneu_0740
Subtype I-B factors
Tneu_0740
Subtype I-C factors
Tneu_0740
Subtype I-D factors
Tneu_0740
Type II CRISPR-Cas system
Subtype II-B factors
Tneu_0740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
PDDEXK_3
Motif
Other DBs
NCBI-ProteinID:
ACB39679
UniProt:
B1YD16
LinkDB
All DBs
Position
complement(659495..660148)
Genome browser
AA seq
217 aa
AA seq
DB search
MELLLPRPICSLVNCDDLENSIDADSALEEMKKEQEVFRLLPDVYAYRYDFRRISPSVIN
DFEYCPRLLWVQYKLGLKLFTKSSAISLVRGRLLHERYERAVSAFDNVITEYKVEVGDLV
GVIDVVIRKGGRSIPVEVKTGLASKEAHRKQLQIYIYLLNAGYGYLVYRNKVERVERDDR
AVELLMEIKKVLSSDRPPAARCGRCPFEVICRNVATR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggagcttctgcttcctaggcccatctgtagcttggtgaactgcgacgatttggagaat
tcgattgacgcagacagcgcgctggaggagatgaaaaaggagcaggaggtctttaggcta
cttccagacgtctacgcatacaggtacgactttaggagaatctcgccctccgtaatcaac
gacttcgagtactgccctaggctgttgtgggttcagtataagctcgggcttaagctcttc
acgaagagctcggccatttcgctggtccgcgggaggttgctccacgagaggtatgaaagg
gcggtctcagccttcgataacgtgatcaccgagtataaggtagaggtgggggatctcgtc
ggcgttatcgacgtcgtaattaggaagggggggcgtagcatacctgtggaggtgaagaca
ggtcttgcgtcgaaggaggcgcacaggaagcaactgcagatatatatctacctcctaaac
gccgggtatggatatcttgtgtacagaaataaggtcgagagagttgagagagacgataga
gcggtggagttgctcatggagataaaaaaggtgttgagctcggatagaccccccgcggct
agatgcggtagatgtccctttgaggtgatatgtagaaacgtggctacccggtga
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