Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004908G001
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Entry
GSTEN00004908G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K23343
coiled-coil domain-containing protein 22
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00004908G001
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00004908G001
Membrane trafficking [BR:
tng04131
]
Endosome - Lysosome transport
Others
Others
GSTEN00004908G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Multi subunit type E3 associated proteins
GSTEN00004908G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
DUF3573
Motif
Other DBs
NCBI-ProteinID:
CAF90574
UniProt:
Q4T958
LinkDB
All DBs
Position
undetermined
AA seq
1171 aa
AA seq
DB search
MEEVDNILIHALKQVGTDVGEEVGSIKQFSSELLVEAVVTCVRLIHPSLGASLPAALPPG
MSARFRVGVSLAQACQVGASSQPVPSPFPACSQPVPTCSQPVLTCSQPVPSLFPARSHLF
PARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSPVPSPFPACSHLFPASSQPVLTCSHLF
SPVPTLFPASSQPVPSLFPARSQPVLTCSQPVLTCSQPVPSPFPACSHLFPASSQPVPSL
FPARSQPVLTCSPACSHLFPARSQPVPSLFPARSQPVPTLFSPVPSLFPARSQPVLTCSQ
PVLTCSQPVPSLFPACSQPVPSPFPARSHLFPARFQPVPSPFPARSHLFPARFQPVPSPF
PACSQPAGGGSWCDGISFQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRERSEKLD
QPTGKLEVLQRAVAAAIRAQLSAPWLPPNCRLPLQSSSRVRRLLVDLLQRELPRSPPLRW
CASDVQEYQRSFLRPVTAQLSSRSSAVASVLEQHSAELSAAQQWESEWNSQGLLSRLTPQ
VGPQLQAGDQKSPPGRWRASPVSMATLAPRVRWLCVVEQEYRSRKQTRLHKRIEEQLRSA
VLPPSESASTSDLSEVLQSLRGSAPSDSLLLKGTHFTHTQKFSFTRAAASPVAMASPVAM
ASPAGAQPESDGQLHQQVLTSLQQQVQQLDADVHHLTQDMKRMGVAYTQMSNELKQRRLE
NSEKEEKTEVKKKTIHLLPDADNNLVQLQLVVESSVKRVVNLASQWEKHRAPLIQEHRRL
KEMCSHQDLESSRKLSEIKSLHEKIRVCTEEAKEKEDVYKQLVTELDSLPQDASRSAYTQ
RILEIVSNIRKQKEEITKVGQGGGALDAPGWTPRGGRSGVDAPGWTLRGGRPGVDVPGWT
LRGGRPGVDAQGWTLRGGRPGVDALGWTQALTSVLFQILMDTKHLQKDINALTGKLDRTF
AVTDEMVFKDAKKDESVRKSYKYLAALHENCNQLIQTIEDTGTILREIRDLEEQIETESG
NKTVANLERILEDYRAVRQENSALAARVRDV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttgacaacattttgattcacgccctcaaacaagtgggaacggacgtgggc
gaggaggtcggcagcatcaagcagttcagcagcgagctgctggtggaggccgtggtcacg
tgtgtccgcctcatccaccccagcctgggcgccagcctgcccgccgcgctgcccccgggc
atgtccgcccgcttccgggtgggcgtgagcctggcgcaggcctgccaggtaggagcctct
tcccagcctgttcccagcccgttcccagcctgttcccagcctgttcccacctgttcccag
cccgttctcacctgttcccagcccgttcccagcctgttcccagcccgttctcacctgttc
ccagcccgttcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctgttctcacctgttcccagcccgttccca
gcctgttctcacctgttcccagccagttcccagcctgttctcacctgttctcacctgttc
tcacctgttcccaccctgttcccagcctcttcccagcccgttcccagcctgttcccagcc
cgttcccagcccgttctcacctgttcccagcctgttctcacctgttcccagcctgttccc
agcccgttcccagcctgttctcacctgttcccagcctcttcccagcccgttcccagcctg
ttcccagcccgttcccagcccgttctcacctgttccccagcctgttctcacctgttccca
gcccgttcccagcctgttcccagcctgttcccagcccgttcccagcccgttcccaccctg
ttctcacctgttcccagcctgttcccagcccgttcccagcccgttctcacctgttcccag
cctgttctcacatgttcccagcccgttcccagcctgttcccagcctgttcccagcccgtt
cccagcccgttcccagcccgttctcacctgttcccagcccgttttcagcctgttcccagc
ccgttcccagcccgttctcacctgttcccagcccgttttcagcctgttcccagcccgttc
ccagcctgttcccagcctgctggaggaggttcttggtgtgacggaatctcttttcaggac
ctgggttataaaggcgagatcggctaccagacgttcctctacagcaacgagccggagatc
cgttctctgctcatgttcctggtggagaagctgcctcgagaacgttcggagaagctggac
cagcccaccgggaagctggaggttcttcagagggccgtggctgctgccatcagggcccag
ctgtctgcgccctggctgccccctaactgcaggctgccgctccagagctcctccagagtc
agacgcttgctggtggacctgctgcagagagagctcccccgctcacctcctctccgctgg
tgtgcttcagacgtgcaggagtaccagaggagcttcctccgcccggtgacggcccagctc
tcctcccggagctccgcggtggcctccgtcctggagcagcacagcgccgagctgagcgca
gcgcagcagtgggagagcgagtggaactctcaggggctgctgtcccggctgactccgcag
gtaggacctcagctccaggcgggtgatcagaagagcccgccaggcaggtggcgggcatcg
cctgtgtccatggcaacgctggcgccgcgtgtgaggtggctttgtgtggttgagcaggag
taccgcagcaggaaacagacgcgccttcacaagcgcatcgaggagcagctgcgctcggct
gtgctgccgccgtctgaaagcgcctccacctctgacctgtctgaggtgctccagagcctc
agaggctccgccccctccgacagcctcctcctcaaaggcacccacttcacccacacccag
aagttctccttcacacgcgccgccgccagccccgtcgccatggcgagccccgtcgccatg
gcgagccccgctggcgcccagccggagagcgacggccagctccatcagcaggtgctgacg
tcactgcagcaacaggtccagcagctggacgctgacgtgcaccacctgacgcaggacatg
aagcgcatgggcgtcgcctacacacagatgtcaaacgagttgaagcagagacgactggaa
aactctgaaaaggaggaaaagacggaggtgaagaagaaaaccatccatcttctgcctgac
gcagacaacaacttggtgcagctccagctggtggtggagagcagtgtgaagcgagtggtg
aacctggcctcccagtgggaaaaacaccgcgctccgctcatccaggagcaccgccgactg
aaggaaatgtgcagccaccaagacctggaatcttccaggaaactgtcagaaatcaagtct
ctgcatgaaaaaatccgcgtttgcacggaagaagccaaggaaaaggaggacgtgtacaaa
cagctggttacagagctggacagtcttcctcaggacgcgtctcgctcagcctacactcag
aggatcctggaaattgtcagcaacatcaggaagcagaaggaggagataaccaaggtgggt
caagggggcggagcgctggacgccccggggtggacgccccggggtggacgctcaggggtg
gacgccccggggtggacgctcaggggtggacgccccggggtggacgtcccggggtggacg
ctcaggggtggacgccccggggtggacgctcaggggtggacgctcaggggtggacgtccc
ggggtggatgccctggggtggacgcaggctctgaccagcgtcctctttcagatcctgatg
gacaccaagcatctgcagaaggacatcaacgctctgacgggcaaactggaccgcaccttt
gctgtgacggacgagatggttttcaaggatgccaagaaggacgagtctgtgcgtaaatcc
tacaagtacctggcggctctgcacgagaactgtaaccagctgatccagaccatcgaggac
accggaaccatcctgagagagatccgagacctggaggagcagatcgagacagaaagcggc
aacaaaacggtggccaacctggagaggatcctggaggactaccgagccgtccgccaggag
aactccgccctggctgccagggtccgggacgtt
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