Tetraodon nigroviridis (spotted green pufferfish): GSTEN00007419G001
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Entry
GSTEN00007419G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00007419G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GSTEN00007419G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GSTEN00007419G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
dsrm
DEAD
HA2_N
HA2_C
ResIII
nSTAND3
ATPase
AAA_19
AAA_22
AAA_14
DUF6159
Motif
Other DBs
NCBI-ProteinID:
CAF92278
UniProt:
Q4T4A4
LinkDB
All DBs
Position
undetermined
AA seq
1091 aa
AA seq
DB search
AFRSCLSLQTNMADVKNFLYAWCGKKKLTPNYDIRAAGNKNRQKFMCEVRSDPASPTLQV
QVSGFNYIGMGNSTNKKDAQTNAARDFVNFLVRIGEVTATEVPSVTGKKAAVDRRLEELD
LDTPGGAGFGDKEEQQTLESEEVDLNASLHGNWTLENAKARLNQFFQKEKITSEYKYSQV
GPDHNRDHGTGAWLQQKVGGSVVRPVCGATLYHLGVIEAYSGVTKKKEGEALEAFEVNVS
ADLQQQLVSVVQELGVSIPPPPADPSASVSLVQGKMVTFEPSQRQSGAGVVPWSPPQVNW
NPWTSCNIDEGPLAFVSLNVLSFWPQQKCTPEQISKELHEELMCQLDHDESLQKQKCPFQ
ILVERDQLPVKQFEEEILSTIDTNSVVLIRGATGCGKTTQVPQFILDRFIKGGRASDCNI
VVTQPRRISAVSVAERVAYERGEDPGKSCGYSVRFESVLPRPHASILFCTVGVLLRKLEA
GIRGISHVIVDEIHERDINTDFLIVVLRDVVQAYPEVRIVLMSATIDTTMFREYFFNCPI
IETNCNLICGADYTAATTHSMALISEKETSFELVEALLKYIETLQVAGAVLVFLPGWNLI
YSMQRHLETNPHFGSNCYQILPLHSQIPREEQRRVFEPVPDNVTKVILSTNLAETSITIN
DVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFE
RLESHMTPEIFRTPLHEVALSIKLLRLGSIGHFLSKAIEPPPLDAVIEAEHTLKELDALD
SNDELTPLGRILARLPIEPRLGKMMILGCIFHVGDAMCTISAASCFPEPFINEGKRLSFV
HRNFTGSRFSDHVALLSVFQAWDDIRMNGEEAESSFCEHKRLNMSTLRMTWEAKVQLKEI
LVNSGFPEESLMTQMFTTVGPDNNLDVVVSLLTFGSYPNVCFHKEKRKILTTEGRAALIH
KSSVNCPFGSQDLTFPSPFFVFSEKIRTRAISAKGMTLVTPLQLLLFAWKKMTSNGDVVE
LDDWIKLRVPHEVAGGLAALRAGLEALVVEVAQEPENIRQMDQKKQRMLNLVRHVSKATT
AGITLVTNTSR
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
gccttcagaagctgcctgagcctccagaccaacatggcagacgtcaagaactttctgtac
gcctggtgtggaaagaagaagctaactcccaactatgacatccgagctgcaggaaataaa
aacaggcagaagttcatgtgtgaggtgagatctgacccagcttctccaactttgcaggtt
caagtcagtggattcaattatatcggtatgggcaactcgaccaacaagaaggacgctcag
accaatgctgcaagagactttgtcaatttcttagttcggataggagaagtgactgcgaca
gaagttccctctgtaacgggcaagaaggcagcagtggaccggcgcctggaggagctggac
ttggatactccggggggagcgggttttggggacaaggaggagcagcagacgctggagtcg
gaggaggtggacctcaatgccagtcttcacggtaactggactctggagaatgccaaggcc
cgcctgaaccagttcttccaaaaggaaaagatcacctctgaatacaaatacagtcaagtg
ggcccggaccacaacagggatcacgggacgggagcatggctccaacaaaaagttggcggc
tcagtcgtgcgccctgtctgtggtgcgacactgtaccatctgggtgtgattgaggcttac
tcaggagtcacgaagaagaaggagggagaggcgttggaggcgtttgaagtgaacgtctcc
gcagacctgcagcagcagctagtgtcggtggtccaggagctgggagtcagcatcccgcct
ccccctgcagatcccagcgcctcagtgtctctggttcagggaaagatggtgacctttgag
ccttcacagcgtcagagcggggccggagttgtaccctggtccccccctcaggtcaactgg
aacccctggaccagctgcaatattgatgagggaccactggcctttgtgagtctgaatgtc
ctcagcttctggccccagcagaagtgcacgccagagcagatcagcaaggagctgcatgaa
gagctgatgtgccaactggaccatgatgagagcctgcagaagcagaagtgcccctttcag
atcctggtggaacgggaccaactgcccgtcaaacagtttgaagaggagatcttgtccacc
atcgacactaactctgtggtgctcatcagaggagccacaggctgtggaaagaccacccag
gttccccagttcatcctggaccgcttcatcaaagggggccgagcgtctgactgcaacatc
gtggtcacccagcccaggaggatcagcgccgtctcagtggctgaacgcgtcgcctacgag
agaggggaagatccggggaaaagctgtggctacagtgtccgctttgagtccgtccttcct
cggccccacgccagcatccttttctgcaccgtgggagttttactgcgcaaattagaagca
ggaatccgaggcatcagtcacgttatcgtggacgagatccacgagagagacatcaatact
gacttcctgatcgtggtcctcagagatgtggtccaggcctacccagaggtccgcatcgtt
ctcatgtctgccaccatcgacaccaccatgttcagagagtattttttcaactgtcccatc
atcgagacaaactgtaacttaatctgtggagcggactacactgcagcgacaacccattcc
atggctctgatcagcgagaaggagacgtccttcgagctcgttgaggctcttctcaaatac
atcgagacgctgcaggtggctggagctgttctggtcttcctccccggctggaacctcatt
tattccatgcagagacacctggagaccaacccacactttggaagcaactgctaccagatt
cttcctctgcattctcagattccacgtgaggagcagcgtcgagtgtttgaacctgtacct
gacaacgtcaccaaggtgattctatcaaccaaccttgcagaaaccagcatcaccatcaat
gacgtcgtttatgtgattgactcgtgcaagcagaaggtgaagctcttcacctcccacaac
aacatgaccaactacgccaccgtctgggcctcgaagaccaacctggagcagaggaaaggc
cgcgctggccgggtccgtcccggcttctgcttccacctctgcagccgcgctcgctttgag
cggctggagagtcacatgactccagagattttcaggacgccgctgcacgaagtcgctctg
agcatcaaactgctccgacttggatccattggccatttcctgtccaaggccattgagccg
ccaccactggacgccgtcatcgaggctgagcacacgctgaaagagctggatgctctggac
agcaacgacgagctgacgcctctgggtcggattctggcccgtctaccaatcgagcctcgt
ttggggaagatgatgatcctgggctgcatcttccatgtcggcgatgccatgtgcaccatc
tcggctgcatcctgttttccggagcccttcatcaacgagggcaaacgcctcagttttgtc
cacagaaacttcaccggcagtcggttctccgaccacgttgctcttctgtctgtcttccag
gcctgggatgacatcaggatgaacggagaggaggcagagagctctttctgtgagcacaaa
cgtctcaacatgtctactctgaggatgacctgggaggccaaagtccagctgaaggagatc
ttggtcaactctggatttcccgaagagagtctgatgactcagatgttcaccacggtggga
ccagacaacaacctggacgtggtggtgtctctgctgacctttggctcctacccaaacgtg
tgtttccacaaagagaagaggaagattctgacgacagagggacgcgctgccctcatccac
aaatcctccgtcaactgtcccttcggcagccaggacctgaccttcccctcgccgtttttt
gtctttagtgagaagatccggacgagagccatctcggccaaagggatgactctggtcact
cccctgcagctgctgctcttcgcctggaagaagatgacctccaacggagacgtggtggag
ctggatgactggatcaagctgagagttcctcacgaggtggcgggtgggctcgcagctctg
cgggctggactggaggccttggtggtggaggtggcccaagagccagaaaacatcagacag
atggaccagaagaagcagagaatgctgaacctcgtcagacacgtttccaaggcaaccaca
gccggaatcaccctggtgaccaacacctccaggtag
DBGET
integrated database retrieval system
