Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011897G001
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Entry
GSTEN00011897G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00011897G001
03460 Fanconi anemia pathway
GSTEN00011897G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00011897G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00011897G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GSTEN00011897G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Topoisomerases
GSTEN00011897G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
GSTEN00011897G001
FA (Fanconi anemia) pathway
GSTEN00011897G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
zf-C2H2_10
Motif
Other DBs
NCBI-ProteinID:
CAF95297
UniProt:
Q4SVN5
LinkDB
All DBs
Position
undetermined
AA seq
984 aa
AA seq
DB search
MIRSRAQIKRVLCVAEKNDAAKGISEIMSNGRFRRREGMSKFNKIYEFEYHLLGQNVTVA
MTSVSGHLLALEFKAPFQKWHSCNPVILFDAEVEKYCPDNMVQIKRTLEKEVKQCQLLVI
WTDCDREGENIGFEIIDVCKAVKSNIQVLRAKFSEITPNSIRRACSTLTEPDSNVSDAVD
VRQELDLRIVLHEVEEDTVEFSWKRNRLFNHTACLVLYQICMENPIATVTSVTSKPKSKW
RPLPLDTVELEKLASRKLKISAKETMKIAEKLYTQGFISYPRTETNIFPKTLALGSLVEE
QTQSSVWGTFAQRVLDQPGGPSPRQGKKSDQAHPPIHPTRHSSSLQGNEGRLYEFIVRHF
LACVSQDALGQETVVDVDIAQEKFSASGLMIIARNYLDVYPYDRWSTKVIPVYEQGSQFQ
PTAIEMVDGQTSPPQLLTEADLIALMEKHGIGRLQWLFLHGCNPCGHIETIKSRMYVGLT
SDQRFLPGELGMGLVEGAYALRGTKTGLVWLVQMLTRIGLGYNSMGYEMSKPNLRAELEA
DLKLVSEGRKDKRSVLGHHIQKYKTVFIESVQKAKKWVVVTDVGQTEAGMLSDLVCCSLR
LDEALSPYLGAAQEITEEQQQDMEIPLPVRKCPHCGRDMVLKKKREGNGKYLTCVGYPAC
KSAVWFPDTVLEVSRDESVCPTCQPAPVHMLKFKFRRGSLPPVMPLEFVGCIGGCDETLR
EVLDLKYFRAGGSGGGAGNGGSNARPSRPPVPAWTPRPGPPQPGPPRPGPPQAGPPQPGP
PRPGPPRPGPPQPGPPPQALSASRNSDSDAIMCNCGQQAVLLTVRKDGPNQGRQFYKCNG
GTCAFFLWADQPGQDGGPQSRGPPLQPPRTSLRVTHDPGNVGQTVCNCQETAVTRTVQKD
GPNKGRMFHTCGKTREQQCGFFQWADENAPPSGAFAGASNGGANGGTQARRTTGAADKPP
AAKRARTCGVCRTPGHTRATCPQR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgattcggagccgagcgcagattaaacgggtcctctgcgtggccgagaagaacgatgcg
gccaaaggcatctcagagatcatgtccaatggcagatttaggagaagagaagggatgtca
aagtttaataagatctacgagtttgaataccatctgcttggtcagaatgtgacagtagct
atgacatcagtatcaggccacttacttgctctggaattcaaagcaccctttcagaaatgg
cacagctgcaatcctgttattttatttgatgcagaggtagagaaatactgtccagacaac
atggtgcaaattaagcggacactcgagaaagaggtgaagcagtgtcagctattagttatc
tggactgactgtgacagagagggggaaaatattggttttgaaatcatagatgtctgcaaa
gcagttaagtccaacatacaggttcttcgcgcaaagttttctgaaatcacccccaactct
attcggagagcctgcagcactctaacagagccagattccaacgtcagtgacgctgtggat
gttcggcaggagctggacctgaggatagtgctgcatgaggtagaggaggacactgtagag
tttagttggaaaagaaatcgtctcttcaaccacaccgcttgtctggtgctctaccagatt
tgcatggagaatcccatagcaacagtcacctcagtaaccagcaaaccaaagagcaaatgg
agaccgctgcctttggacacagtggagctggagaaactggcatctcgcaaactaaaaata
agtgccaaagagaccatgaaaattgcggaaaaactctatactcaaggcttcatcagttat
cctcgtacagagaccaacattttccccaaaaccctggcccttgggagcctggtggaggag
cagacgcaaagctctgtctgggggacgtttgcccagagggtgctggatcagcctgggggc
cccagcccacggcagggcaagaaatctgaccaagcccacccgcccatacaccccaccagg
cacagcagttccttacaaggcaacgaagggcgtttgtacgagtttattgttcggcacttc
ctggcttgtgtatcccaggatgctttggggcaggagaccgttgtagacgtagacattgcc
caggagaagttctctgcatcaggactcatgataatcgcaaggaactaccttgatgtttac
ccatatgacagatggagtacaaaggtgatcccagtctatgagcaaggctcccagttccag
cccacagctattgagatggtggacggacagacgagtcctccacagctgctcaccgaagcc
gacctgatagccttaatggagaagcacggcatcggtaggctgcagtggttgtttttgcac
ggatgcaacccatgcggacacatcgagaccatcaagagccgcatgtatgtggggctgacc
tccgaccagaggttcctgcccggagaactgggcatgggactggtggaaggtgcgtatgcg
ctgcgtggaacaaaaaccggtctggtttggctggtgcagatgttgacacgtattggttta
ggctacaactccatgggttacgagatgtccaagccaaacttgcgagctgagctggaggca
gacctgaagctcgtgtctgagggcaggaaggacaaacgcagcgtgctggggcaccacatc
cagaaatacaagacggttttcatcgagtcggtccagaaggcaaagaagtgggtggttgtt
actgatgtgggacagaccgaagctgggatgttgtctgacctcgtttgctgttccctcagg
ttagatgaagcgctgtcaccgtatctaggcgccgctcaggagatcacagaagaacaacag
caggacatggagatccccctgcccgttaggaagtgtccccactgtgggcgagacatggtg
ttgaagaagaagagagaaggaaacggtaaatacctcacctgtgtgggttacccagcctgc
aagtctgccgtgtggttccctgacacggtgctggaggtcagcagagacgagtccgtttgt
cccacctgtcagcctgctcctgttcacatgttgaagttcaagtttcgtagaggaagcctc
cctcccgtgatgcctctggagtttgtcggctgcatcggcgggtgtgatgagacgctcaga
gaggtgctggacctgaaatacttcagagcggggggatctggggggggggcagggaacgga
ggttcaaatgcccgcccttcacgtcctcctgtccccgcctggacgccacggcctggacct
ccacagcctggacctccacggcctggacctccacaggctggacctccacagcctggacct
ccacggcctggacctccacggcctggacctccacagcctggacctccacctcaggctctc
agcgccagccggaactctgacagcgacgccatcatgtgcaactgcggccagcaggcggtc
ctcctgaccgtccgcaaagacggtccgaaccaaggacgccagttctacaaatgcaacggc
gggacatgcgctttctttctgtgggccgatcagccgggtcaggacgggggcccccagagt
cggggtcctcctctgcagcctcccaggacctctctaagggtcactcatgacccaggcaat
gtgggacagactgtgtgtaactgccaggagacggcggtgacgcgcacggtgcagaaggac
ggtcccaacaagggcagaatgttccacacctgcgggaaaacaagggagcagcagtgtggc
ttcttccagtgggctgatgagaacgcacctccctcaggtgcctttgctggcgcaagcaac
ggcggtgccaacggagggacccaggccagaaggacaacgggcgccgctgacaagcccccc
gccgccaagagggcccgtacgtgtggtgtctgccgcacccccggacacacccgggccacc
tgcccccagcga
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integrated database retrieval system
