Tetraodon nigroviridis (spotted green pufferfish): GSTEN00012861G001
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Entry
GSTEN00012861G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04681
retinoblastoma-like protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04110
Cell cycle
tng04218
Cellular senescence
tng04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00012861G001
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
GSTEN00012861G001
04218 Cellular senescence
GSTEN00012861G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00012861G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
GSTEN00012861G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
RB_A
RB_B
DUF3452
Keratin_2_head
TPR_MLP1_2
Complex1_LYR_2
Motif
Other DBs
NCBI-ProteinID:
CAF96000
UniProt:
Q4STN2
LinkDB
All DBs
Position
undetermined
AA seq
1311 aa
AA seq
DB search
MSLSRSKRISSSNSVRSSSGGMSRLSGFGPAPGGFSGISMGSSSLYAGTNGYLQSAAAPL
TPLSVNKSLLAPLNLDIDPSLYINRTHEKEQIKSLNNRFASFIDKVRYLEQQNKMLETKL
ELLQGQGVRGSNVEPMFEAYMSTLRCQMDVVNNEKTKLNGELKNMQGLVEDYKHKYEDEI
NKRNNLENDFVILKKDVDSAYLVKADLEDKVGSLTDEINFLRNVYEEELCELQASIKDTS
VVVQMDNRRSLDMEQIIAEVKAQYEEIAVSSREEAEAWYKSKYDQMSMQASQYGDKLRAV
KAEVLEVNRLISRLQSEIEAVKSQRGNLENQLTEAEERGELAIKEAKARARDLEDALQRA
KQDMARQLREYQDLMNVKLALDIEIATYRKLLEGEEDRLGQHSVLNIQTLSNFSEVVHWL
ACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSRLSLIQFFSKMRKWADMSNLSQDFR
LRLKQLERNFEVSMVIFRKRLPCHTSDVFRFCWTLFVYAKGNFCMIGDDLVNSYHLLLCC
LDLVFGNALLCSNRKELVNPSFKGGSFGYPADGHAALDQPPCVLERLCELHDGLVVEAKG
IKQHYFRPYIQKLFEKKILKGKEEHLTQLLDPQNFLENNKALNKEYEEYVLTVGDFDERV
FLGADADEEIGTPRKLVGDSSACQKNAQQHLEKSASLVPSTPLTGHAYLKENNTLGTPIS
SATQSVSRLQSMVAGLRTAPSENLMQIFRSCSRNPSEAITARVRRLGQTFKEHYSLDSED
TPASHIDFAEKRLKLAEILYYKVLENVMVQETKRLHGKDMSILLEQDIFHCSLMACCLEV
VLFSYSSQRTFPWIINVFKLASFYFFKVIEVFIRSEEGLSRDMVKHLNQIEEQVLESQAW
SRDSALWGALQAAGSKVPSVEEMCLLLRLSVHERYSSPAAGSAKRPLFGEEHPPPGLAHG
LALISPAKRLMIGPSSTLKISAPGSAPALAVPLQEDPVQLTGLWAGPACLQVYHLASVRL
RDLCWKLDISAELRARIWTCLEHTLIHCTELMRGRHLDQLLLCSVYIMSKARRPTPKPEP
QRAGRQQQRVTDRFPCVQQVTKETHFFHDIMKCYRSQPQASSHVYRNVLLRHSPGECVSE
EKMEVDAAPAADGAGSSQSGEEQRGDLIQFYNTVFVLKVKNFAVRYAVSDSEGGAPPLSP
FPSLRAQPLSPRRVSQRHSLYVSPHKSSSGGPALNSYSYRINSSPSDELTAINRIIQQGC
VSRKRVFASDGDELPSASPSPSKRACSQGSSSPDVLLKRLQDVVSERQSLP
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgagccgctccaagagaatcagctccagcaactcggtccgaagcagcagtggc
ggcatgagtcggctgagcggctttggtccagctccaggtggcttcagcggcatctccatg
ggcagcagctctctgtatgcgggcaccaacggctatctccaaagcgctgcagccccactc
acacccctgtcagttaacaagagcctactggcccccctcaacctggacatagacccaagc
ctctacataaacaggactcatgaaaaggagcaaatcaaaagcctcaacaaccgctttgcc
agctttattgacaaggtgcgttacctggaacagcagaacaagatgctggagaccaagctg
gagctgctgcagggccaaggggtccggggctccaacgtggagcccatgttcgaggcttac
atgtcaaccttgagatgtcagatggatgtggtcaacaatgagaagaccaaactgaacggg
gaactgaagaacatgcaaggcctggtggaggactacaaacacaaatacgaggacgagatc
aacaagagaaacaaccttgagaatgactttgttatcctcaaaaaggatgtggactcagcc
tatctggtgaaagcagatctggaggacaaggtcggatccttaactgatgaaatcaacttc
ctgcgtaacgtctatgaggaggagctgtgtgagctacaggccagcatcaaggacacatca
gtggtggtgcaaatggacaacaggcgcagtttagacatggagcagatcattgctgaggtc
aaggcccagtacgaggagatcgcagtgagcagtcgggaggaggcagaggcctggtacaag
agcaaatatgaccaaatgtccatgcaggccagccagtatggggacaagctccgcgcggtg
aaggcagaggtgctggaggtcaatcgcctcatcagccgcctgcagtctgaaatagaagct
gtcaaatcacagcgaggcaatctggaaaaccagctgaccgaagcagaggagcgtggagaa
ctagccatcaaagaagccaaagcccgcgccagggacttggaggatgctctgcagagagcc
aaacaggacatggccaggcagctccgagagtaccaggacctgatgaacgtgaaactggct
cttgacattgagatcgccacctacagaaagttgctggaaggagaagaagaccgacttggg
cagcattctgttctcaacatccagacgctttcaaacttcagcgaggtggtccactggctg
gcctgctcgctgtacgcagcctgtcgcaaaggctccacccccacggtgggcaaggggctg
atggagggcaactgtgtgtctctgaccaggatcctgcgctcgtccaggctcagcctgatc
cagttcttctccaagatgaggaagtgggcggacatgtccaacctgtcccaggacttccgg
ctgaggctgaagcagctggagcgcaacttcgaggtctccatggtcatcttccgcaaacgc
ctgccctgtcacaccagcgacgtgttcaggttctgctggactctctttgtctacgccaaa
ggtaacttctgcatgatcggggacgacctggtgaactcctaccacctgctgctctgctgc
ctggacctggtgttcggcaacgctctgctctgttccaacaggaaggagctcgtcaacccc
tccttcaaaggtgggtcgttcgggtaccccgccgatggccacgccgcgctggatcagcct
ccctgcgtgctggagcggttgtgtgagctgcacgacggtctggtggtggaggccaagggc
atcaagcagcactacttcagaccctacatccagaaactctttgagaagaagatcctgaaa
gggaaggaggagcatttgacccagctgctggaccctcagaacttccttgagaacaacaaa
gccttgaacaaggagtatgaggagtacgtgctgacggtgggggactttgacgagcgcgtc
ttcctgggcgccgacgcagacgaggaaatcgggactcccaggaagcttgttggggactcg
tcggcctgtcagaagaacgctcagcagcacctggagaagtctgcctctctcgttccgtcc
acacctctgaccggacacgcctacctgaaagagaacaacaccctgggcactcccatctcc
tcggcaacccagagcgtcagccggctgcagagcatggtggccgggctgagaacagccccc
agtgagaacctgatgcagatcttcaggtcctgctccagaaacccctccgaggccatcacg
gccagggtcaggaggctgggccagaccttcaaggagcactactccctggactctgaggac
acgcccgcttcccacatagacttcgcggagaagcgcctgaagctggccgagatcctttac
tacaaggttctggagaacgtgatggtccaggaaacgaagcggctgcacggcaaagacatg
agcatcttgctggaacaggacatcttccactgctccctgatggcctgctgtctggaggtg
gtcctgttctcctacagctcccagagaaccttcccctggatcatcaacgtcttcaaactg
gcttctttctacttcttcaaggtgatcgaggtgttcatccgctccgaggagggcctgtcg
cgggacatggtgaagcatttgaaccagatcgaggagcaggtcctggagagccaggcctgg
agccgggactcggccctgtggggggcgctgcaggccgccggcagcaaggttccctcggtg
gaggagatgtgcctccttctccgtttgtcagtccacgagcgctacagctccccggcggct
ggcagcgccaagcggcctctcttcggcgaggagcacccgcctccggggctcgcccacggc
ctggccctgatttcgcccgccaagaggctgatgatcgggcccagcagcaccctgaagatc
agcgctccaggctccgcgccggctctggccgtcccgctccaagaggacccggtccagctg
acggggctgtgggccggccctgcgtgtctgcaggtgtaccacctggccagcgtgcgcctg
agggacctgtgctggaagctggacatctctgcggagctgcgggccaggatctggacctgc
ctggagcacacgctgatccactgcaccgagctgatgaggggccggcacctggaccagctg
ctgctctgcagcgtctacatcatgtccaaggcgaggaggcccaccccgaaaccagagccg
cagcgcgccggcagacagcagcaaagagtcaccgaccggtttccgtgtgtccaacaggtt
accaaggagacgcacttcttccacgacatcatgaagtgctaccgcagccaaccgcaggcc
agcagccacgtgtaccgcaacgtgctgctgcgccacagccccggggagtgtgtgtctgag
gagaagatggaggtggacgccgctccggccgctgacggagccggctccagccagtcgggg
gaggagcagcgaggagacctcatccagttctacaacaccgtctttgtcctgaaggtgaag
aactttgccgtgcgctacgccgtcagcgacagcgagggtggcgctcctcctctctctccg
ttcccgtcgctcagagctcagcctctctctcctcgccgggtctcccagagacattcgctc
tacgtgtcccctcacaagagctccagcgggggccccgccctcaattcctactcctacagg
atcaacagcagcccgtctgatgagctaacggccatcaaccgcatcatccagcagggctgc
gtgagcaggaagagggtcttcgccagcgacggggacgagctgccctcggcctcgccctcc
cccagcaagagggcttgttcccagggcagcagcagccccgacgtgctgctgaagcggctg
caggacgtcgtgtccgagcgacagagcctcccctga
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