Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014753G001
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Entry
GSTEN00014753G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07562
60S ribosomal export protein NMD3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00014753G001
03008 Ribosome biogenesis in eukaryotes
GSTEN00014753G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00014753G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
GSTEN00014753G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMD3
NMD3_OB
NMD_SH3
Motif
Other DBs
NCBI-ProteinID:
CAF97404
UniProt:
Q4SPM8
LinkDB
All DBs
Position
16
AA seq
549 aa
AA seq
DB search
MDRLAEISDRPGAPGAASKRLYEWINDHTTYAYLAHCVEAKTTQKPKYQYTKKPVPHVTV
QIPLTTSGAKNHKIVPTAKSVEPHPPPATEKPWSSNHGFQNDHPQSTEPPGAGPENYTLD
YNECYFNFCECCPPERAPGGPRETGAWKGNEVRGGAVVRLDNQDCLENLDKKGILMTVSL
QVLNGAILQQVFVVEFVVQNQMCDDCHRVEAKDFWKAVVQVRQKTSHKKTFYYLEQLILK
HKLHSNALNIKEIHDGIDFYYGLKQHAQKMVDFLQCTVPCRSKASQRLISHDIHSNTYNY
KSTFSVEIVPVCKDNVVCLSPRLAQSLGNMGQVCVCVRVTSTIHLIDPATLQIAEVDGNT
YWRNPFNSLCNPRQLEEFIVMDIDIIRDQKLGAGAGTRSSRHTLAEVWVQKTSEMDTSQQ
YHCRTFLGHLLNIGDLVLGFDFANSNINDEHLNKMNPHHIPDVRGRQVKSLGFKPLYVDP
QRQYQDFLEDLEEDEALRKNVNIFRDASKIPVESDTDDDGAPQISLAEMLEELSLTDATG
EEGADMLTD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacaggctggctgagatatcagacagacccggagctcctggtgctgcctccaagaga
ctgtatgagtggataaatgaccacaccacctatgcatacctggcacactgcgttgaagcc
aagaccacgcagaagccaaaataccagtacaccaagaagcctgtcccacacgtcactgtg
cagatccctttgaccaccagcggggccaagaaccacaagattgtgccaactgccaaatcg
gtggaacctcatcctcctccagccacagagaagccctggtcctcaaaccatggctttcag
aacgaccaccctcagagcaccgagcctcctggcgccggccctgagaactacacgctggat
tacaacgagtgttacttcaacttctgtgagtgctgcccacctgagagggccccagggggc
ccaagggagacaggggcctggaaggggaacgaggtgagagggggggcagtggttcggctg
gacaaccaggattgcctggaaaacctggacaaaaagggaatcttgatgacggtgtctctg
caggtgttgaacggcgccatcctacagcaggtgtttgtggtggagtttgtggtccagaac
cagatgtgtgacgactgccaccgcgtcgaagccaaggacttctggaaagctgtggttcaa
gtcagacagaagacgtctcataaaaaaaccttctattacctggagcagcttatccttaag
cataaacttcactcgaatgccctcaacatcaaagaaattcatgacgggattgatttctat
tacggcttgaagcagcacgctcagaagatggtggacttcctccagtgcaccgtgccctgc
aggtcaaaggcctcccagcgcctcatctctcacgacatccattcaaacacgtacaactac
aagagcaccttttctgtggaaattgtacccgtctgcaaggacaacgtggtgtgcctttca
cctcggctggcacaaagtctggggaacatgggtcaagtgtgcgtgtgtgtccgagtgacg
agcaccatccacctcatcgaccccgccaccctgcagattgctgaggtggacggaaacacg
tactggcgtaaccccttcaacagtctgtgtaacccacggcaactggaggagtttattgtc
atggacattgacatcatccgggaccagaagctgggtgctggagccggcacgaggtccagc
aggcacaccctggcggaggtgtgggttcagaagacatccgagatggacaccagtcagcag
tatcactgtcgaacgttcctgggccacctgctcaacatcggggacctggtgctggggttt
gactttgccaattccaacatcaacgatgagcatctgaacaagatgaacccccaccacatt
cctgacgtgcgggggcgtcaggtgaagagtctgggttttaaaccgctgtacgtggacccc
caaagacaataccaggacttcctggaggacctggaggaggatgaggctctgaggaagaat
gttaacatctttagagacgcttcaaagatcccggtggagagcgatacggatgacgacggc
gcacctcagatctctctggccgagatgttggaggagctgagcctgacagacgccacgggg
gaggagggcgccgacatgctgacggactaa
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