Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015531G001
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Entry
GSTEN00015531G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06841
semaphorin 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
Sema
TSP1_spondin
PSI
TSP1_CCN
TSP1_ADAMTS
Motif
Other DBs
NCBI-ProteinID:
CAF98002
UniProt:
Q4SMY0
LinkDB
All DBs
Position
6
AA seq
1105 aa
AA seq
DB search
PVLSVAEMEPWIFRFKAEGTVDYSQLTFDPGQNELIVGARNHLFRLNLEDLTLIQPFESV
IRRVTAQPAELGLRSRTCDRGRIGKSLHSSTCWQILGLKGRLGEAEWHCDEFTRGACFSR
GKSEEECQNYIRVLLVNGNRLFTCGTNAFTPICTNRTLTNLTEIHDQISGMARCPYNPLH
NSTALITSSGELYAATAMDFSGRDPAIYRSLGGLPPLRTAQYNSKWLNEPNFVSSYDIGN
FTYFFFRENAVEHDCGRMVFSRAGRVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFN
YNELQGTFYLPELELLYGIFTTNVWSPPLLLVSTYRNSIAASAVCTFNLSAIAQVFRGPF
KYQENSRSAWLPYPNPNPDFQCGTIDSGSYVNLTERNLQDAQKFLLMHEPVDPVPYFMED
SVRFTHVAVDVVQGKDVLFHIIFLATDYGTIRKVLSPLNHSTGSCLLEEIELFPPRKRQP
IRSLLILHSRSELYVGVRDQVIKIPLKRCSYHKSREACVGARDPYCGWDLLLKKCTTLEE
SVRMSQWEQSITKCPVRNVTVDGGFGAWSGWSACSHNDGGNGGSCLCRTRACDSPSPQCG
GQQCQGISVEVANCSRNGAWTPWTSWSPCSTSCGIGFQVRQRSCSNPSPRHGGRVCVGQN
REERYCNEHLPCPPHVYWSAWSVWERCTVACGGGIQSRRRTCENGNDCPGCGQILTCYHA
LVRGLACVPSRSVFGTLSTTEAPREFCCILGVYNIDRQIKEAEFLGPPGNSELMLATNEY
QSCNTLPCPDLKKTTPWTPWTPVNISDNGGHYEQRFRYTCKARIPDPSLLEVGRQRIEMR
YCSSDGSTGCSTDGDVLRLGRISGNTLNGGWSSWTSWSQCSRDCSRGIRSRKRTCNNPEP
KYGGQACQGPAQEYQECNITPCPVDGSWSCWSSWSKCSVTCGGGHYMRTRTCSNPPPAYG
GDICLGLHTEEALCNTQPCPEVSIARSSQDERRCGDFNLFHMIAVGLSSSILGCLVTLLV
YSYCQRYQQQAHDATVIHPITAAPLNTSITNHINKLDKYDSVEAIKAFNKNNLILEERNK
YFNPQLAGKTYTNAYFTDLNTYDDY
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
cctgtcttgtctgtggcagagatggagccgtggattttcaggttcaaagcggagggcacg
gtggattactcccagctgaccttcgaccccgggcagaacgaactgatcgtcggtgccaga
aatcacctcttcaggcttaatctggaggacctgacactgatccagccctttgagtcggtg
atcagaagagtgacggcgcagccagccgagcttggtctgaggagccggacgtgcgacagg
ggcagaatcgggaagagtcttcattcctcaacctgctggcagatcctcggactgaaaggc
aggctgggagaggcggagtggcactgtgacgagttcaccaggggagcctgcttcagccgt
ggaaaatctgaggaggagtgccagaactacatcagagtgctgctggtgaacgggaacagg
ctgtttacctgtggaaccaacgccttcacccccatctgcaccaaccgaacgctgaccaac
ctgactgagatccacgaccagatcagcgggatggctcgctgcccctacaaccccctccac
aactccaccgccctcatcacctccagcggggagctctacgccgccaccgccatggacttt
tctgggagggaccccgccatttaccggagcctgggcggcctgccgccgctgcgcacggct
cagtacaactcaaagtggctgaatgagcccaacttcgtctcctcctatgacatcggcaac
ttcacctacttcttcttccgggagaacgcggtggagcacgactgcggccggatggtgttc
tcgcgcgccgggcgggtgtgcaagaacgacatcggtggccgcttcctgctggaggacacc
tggaccaccttcatgaaggccaggctgaactgctcgcgtccaggggaggtccccttcaac
tacaacgagctccaggggaccttttacctgcccgagctggagctgctttacggcattttc
accaccaacgtgtggtcacccccccttcttctcgtctccacctacagaaacagcatcgct
gcgtctgcggtgtgcaccttcaatctcagcgccatagcgcaggtcttcaggggccccttc
aagtaccaggagaactcccgctcagcgtggctgccgtaccccaaccccaaccccgacttc
cagtgcggaaccatcgactcgggctcctacgtgaacctgaccgagaggaacctgcaggac
gcgcagaagtttttgctcatgcacgagccggtggaccccgtcccgtacttcatggaggat
agcgtgcgctttactcacgtggccgtggacgtggtgcagggcaaagacgtgctctttcac
atcatcttcctggctacagattacggcaccatccggaaggtgctttctcccctcaatcat
tccaccgggagttgcctgttggaggagatcgagctgttcccgcccaggaagcggcagccc
atccggagcctgctgatcctgcacagccgcagcgagctctacgtgggcgtgagggaccaa
gtcatcaagatcccgctgaagagatgcagctaccacaagagtcgggaagcctgcgttggg
gccagagacccgtactgcggttgggacctgctgttgaagaaatgcaccaccctggaagaa
agcgtccggatgagccagtgggagcagagtatcaccaaatgcccggtccgaaatgtgacg
gtggacggaggctttggcgcctggtccggctggtcggcgtgcagccataacgatggcggc
aatggcggatcctgcctgtgccggacgcgcgcctgcgatagcccctcccctcagtgcggg
ggccagcagtgccagggcatcagtgtggaggtggccaactgctccaggaacggagcctgg
actccctggacctcctggtctccctgcagcaccagctgcggcatcggcttccaagtgcgc
cagcgctcctgcagcaacccgagcccgcgccacggcggacgagtgtgcgtgggccagaac
cgcgaggagaggtactgcaacgagcaccttccctgcccgccgcacgtttactggtcggcc
tggtcggtgtgggaacgctgcacggtggcttgtggagggggcatccagtcacgtcgcaga
acctgcgagaacggcaacgactgtcccggatgcggtcagatactgacctgctaccatgcg
ctggtgcgggggctggcatgcgtccccagcaggtctgttttcggtacactgagcacgact
gaggcgccgcgggaattctgctgcatcctgggtgtttacaatatagatcgacaaatcaag
gaggcggagttcttaggacctccaggtaactcggagctaatgctagccaccaacgagtac
cagtcgtgcaacaccctgccctgccccgacctgaagaagaccacgccctggaccccctgg
acgcccgttaacatctccgacaacggcggccactacgagcagcgcttccgctacacctgc
aaggcccgcatcccggacccgagtctgctggaggtgggaaggcagcgcatcgagatgcgc
tactgctccagcgacggctccactggctgctccacagacggagacgttctccgcctcggt
aggatctccgggaacaccttgaacggcggctggtcgtcctggacctcctggtcgcagtgc
agcagggactgcagccggggcatccgcagccggaagagaacctgcaacaacccagagccc
aagtacgggggtcaggcgtgccaggggccggcgcaggaataccaggagtgcaacatcacg
ccctgtcctgtggatggcagctggtcttgctggtcctcctggtccaagtgctccgtgaca
tgcggaggggggcactacatgaggacgcgaacctgcagcaaccctcctccagcgtacgga
ggcgacatctgcttgggcctccacaccgaagaagctctgtgtaacacacaaccctgccca
gaggtctccatcgcgcgctccagccaagacgagaggcgctgcggagacttcaacctcttc
cacatgatcgcggtcggcctcagcagctccatcctgggctgcctggtcacgctgctcgtc
tactcgtactgccagcgctaccagcagcaggcacacgacgccaccgtcatccaccccatc
accgccgcgccgctcaacaccagcatcaccaaccacatcaacaagctggacaagtacgac
tcggtggaagccatcaaggctttcaacaaaaacaacctgattctggaggaaagaaacaag
tacttcaacccccagctggccgggaagacctacaccaacgcatacttcactgacctcaac
acctacgatgattat
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