Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016270G001
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Entry
GSTEN00016270G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
GSTEN00016270G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00016270G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00016270G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
GSTEN00016270G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-C3H2C3
ECSCR
FANCL_C
Motif
Other DBs
NCBI-ProteinID:
CAF98529
UniProt:
Q4SLF3
LinkDB
All DBs
Position
7
AA seq
452 aa
AA seq
DB search
ARMALDKGARAVIFDVSDDADAAAELRKTDSLPRPVVLVESDGAEVLMSLVNRNEEAIVR
INIMLNPPRWPHYDVGIVLTIVLAILTIILIFALRYKCRSNRTWDSVHQQTRQAISRLET
KTYNSQGCSGSHRQRAPWGSASSSNSSPICAICLEEFQDGQHLRIISCAHEFHKDCVDPW
LLQHRTCPLCMHNIMGGFYFILNLCSPGSERQAQRIRPQQTPEQSQGFLHHHPTVAQGTT
PSLNMLPFGPGCGYHRPAEGPGRPHRFGSNCRNSAHHYAPRRSCHNYRSSCPAQRSASSS
RLYHGPSAGPQPRRAPGHSRQGDGSCSGGSYHTERSGYLADGPASDSSSGPCHGSSSDSV
LNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGNGHSAARRSSLDTCAQTRPRSLDSV
ENKMGCPEEPQPQTVFNHVHYHRHRHHHYEEE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gcccgcatggctttggacaaaggagctcgagctgttatttttgacgtcagcgatgatgct
gatgctgctgctgagctgcggaagactgactccctcccccgtcctgttgtgttggtggag
tctgatggcgcagaggtgctgatgagtttggtcaacaggaacgaggaggccatcgttcgt
atcaacatcatgctgaatccacctagatggccacactacgatgtgggcatcgtcctcacc
attgtcctggccatcctgaccattatcctcatcttcgccttacgttacaagtgtaggtcc
aacagaacctgggactcggtgcatcagcagaccaggcaggctatcagccgcctggagacc
aaaacctacaactctcagggctgctcaggctctcaccgccagcgagctccgtgggggtcg
gccagcagctcaaattcaagtcccatctgtgcaatctgcctggaggagttccaggatggc
cagcacttaaggattatatcgtgtgctcatgagttccacaaagactgcgtggacccctgg
ctgctgcagcaccgcacttgccccctctgcatgcacaacataatgggtgggttctacttt
attttgaatctgtgttctccaggctcagagcggcaggcccagaggatcagaccgcagcag
accccagagcaaagccagggtttcctccaccatcatcctacggtggcccaaggaaccacc
ccttccctcaacatgctaccgttcggtcctggctgcgggtaccaccgacctgcagaaggt
cccggaaggccccataggtttggaagtaactgcaggaactctgcccaccactacgcccca
cgtcggtcctgccacaactatcgctcgtcctgccccgcccagcgcagtgcgtccagctcc
agactctaccacggaccctcggcggggcctcagccccgcagggcgccgggccacagccga
cagggtgatggcagctgctcgggcggcagctatcacacagagcgcagcgggtacctggcc
gatgggccggcgagtgactccagctcaggaccgtgtcacggttcctccagcgactccgtt
ctcaattgtactgatgtgtctctgcagggggtgtatggcagctggtccaccttccgcagc
tctctgagtagcgattacgatccgttcgtttactacgggcctggcaacggacattctgca
gcccgcagaagtagcttggacacgtgtgcccagacccggcccaggtctctggattctgtg
gagaacaaaatgggctgccccgaggagccgcagccacagactgtgttcaaccacgttcac
taccaccgccacagacatcaccactacgaggaggag
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