Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017500G001
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Entry
GSTEN00017500G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K23455
collagen type VIII alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-ProteinID:
CAF99434
UniProt:
Q4SIU8
LinkDB
All DBs
Position
21
AA seq
641 aa
AA seq
DB search
MLLAPVCMLLMLGAQVFAGGYPPIPHMKYMQPMMKGPIGPPFREGKGHYVDMPPLMEVKG
EPGPQGKPGLRGPPGPPGLQGKPGLGKPGLNGQQGPPGPPGFPGIGKPGLPGLPGKIGPK
GMQGSNGEVGPRGEPGPRGLQGQPGLPGPAGLSLNGKPGLPGMRGPPGMRGEPGIKGGQG
LPGEPGLKGENGNGKPGIPGIRGPPGLKGSSGQPGLPGIGKPGLKGLPGIPGLKGDQGLP
GNQGQPGEPGAPGLQGLPGPVGIGKPGVDGQPGAPGPFGPKGEPGVRGSPGFPGSPGYGK
PGLIGPKGDKGHGGLPGLPGDKGEEGMMGPAGEPGNNGQPGPPGLQGPMGLPGKHGLQGL
KGELGPQGPPGLPGLRGDQGASGIPGKNGIPGEKGLPGPNGSIGKPGPKGEAGHIGLPGN
PGLMGPSGPKGEPGFIGTPGPRGQSGIPGLQGPMGPMGPQGAPGPKGESGLIGPPGIAKQ
GEKGEMGPQGPQGKPGPAGLNGFAGPPGPPGPPAFTAILTTPFPPSAMPIKFDRTLYNGQ
NAYSPATGIFTAPLSGIYYFAYHMHVKGTNLWVALYKNNVPATYTYDEYKKGYMDQASGS
AVLELKEGDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggctcctgtttgtatgctactgatgctgggggctcaagtgtttgctggaggc
tatccgcccattccacacatgaagtacatgcagcccatgatgaaaggccccattggaccc
ccattcagagagggcaagggccactatgttgatatgcctcctttaatggaagtaaagggg
gaaccaggcccccaaggaaagcctggactaagaggtcctcctggcccaccaggacttcag
ggaaaacctggactcggcaagccaggtctcaacggccagcaaggtcctccagggcctcct
ggctttcctggaataggtaagcctggacttccaggccttccaggaaaaattgggccaaag
ggaatgcaagggtctaatggtgaggttggccctcgtggtgaaccaggccccagaggcctc
caaggccaacctggcctgcctggccctgctggtctttctcttaacggaaaacccggactg
ccgggcatgagaggcccccctggcatgcgaggggaaccaggaatcaaaggtgggcaaggt
ctaccaggtgagcctggccttaagggtgaaaatggaaatggaaaacctggtattccgggt
ataaggggtcctcctggactgaaaggcagttcgggacaacctggactcccaggaataggt
aaaccaggactaaaaggtttgcctggaataccaggtcttaaaggtgaccaaggacttcca
ggaaatcaagggcaacctggagagcccggggccccaggtttacaaggacttccagggcca
gttggaattggaaaacctggtgtagatggtcagcctggagcaccaggtccatttggtcca
aaaggtgagccaggagtaagaggttctccaggatttcctggtagtcctggctatggaaaa
cctggtctgattggacctaaaggcgacaaaggtcacggtgggttacctggcctccctgga
gacaaaggagaagaaggaatgatgggaccagctggtgaaccaggaaataatggacagcca
ggacctccaggtcttcaaggcccaatgggactcccaggaaaacatggactgcaaggacta
aaaggagaactgggaccacaggggcctccaggattaccaggtctccgaggggatcaaggt
gccagtggaattcctggaaagaatgggattcctggagagaaaggccttcctgggcccaat
ggctcgattggaaaacctggaccaaaaggagaggcaggacatattggcctacctgggaat
ccagggctgatgggtccttcaggtcctaaaggtgaacctgggtttataggaactccaggt
cccaggggacagtcgggtattcctggtctacaagggcccatgggaccaatgggtccacag
ggcgctccaggcccaaaaggtgaatcaggacttatcgggcctccaggtattgctaaacaa
ggagaaaagggagaaatgggtcctcaaggtcctcaaggaaaaccaggccctgccggtctt
aatggttttgcagggcctcctgggcctcctggtcccccagccttcacggccatccttacc
acaccattccctccctcggctatgccgatcaaattcgacaggaccctgtacaatgggcaa
aatgcctacagccctgccactggcatattcacagctcctctatctggcatctactatttt
gcatatcacatgcacgtaaagggaactaacctgtgggtggcgctgtataagaacaatgtt
ccagctacctacacctatgatgagtacaagaaaggttacatggaccaggcttctggaagt
gctgtcctagagctgaaggagggggatcaggtttgggtccagatgccctcagatcaagca
aacggcctgtattctaccgagtacatccactcctccttttcaggattccttctctgcccc
acataa
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