Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018197G001
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Entry
GSTEN00018197G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04010
MAPK signaling pathway
tng04120
Ubiquitin mediated proteolysis
tng04140
Autophagy - animal
tng04144
Endocytosis
tng04620
Toll-like receptor signaling pathway
tng04621
NOD-like receptor signaling pathway
tng04622
RIG-I-like receptor signaling pathway
tng05132
Salmonella infection
tng05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00018197G001
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
GSTEN00018197G001
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GSTEN00018197G001
04140 Autophagy - animal
GSTEN00018197G001
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
GSTEN00018197G001
04621 NOD-like receptor signaling pathway
GSTEN00018197G001
04622 RIG-I-like receptor signaling pathway
GSTEN00018197G001
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
GSTEN00018197G001
09171 Infectious disease: bacterial
05132 Salmonella infection
GSTEN00018197G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00018197G001
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00018197G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00018197G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
GSTEN00018197G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
GSTEN00018197G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
U-box
TRAF3_RING
TRAF6_Z2
DM
zf-RING_11
zf-rbx1
Prok-RING_4
zf-TRAF_2
Motif
Other DBs
NCBI-ProteinID:
CAF99941
UniProt:
Q4SHE1
LinkDB
All DBs
Position
5
AA seq
565 aa
AA seq
DB search
MACFDSSSKGSLEEDSCDGAIGGELSGCALVMMEKEQESLLSPSESPGTYMSGASSSFHD
GTHQQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAGQRCPVDN
EMLSKEQLFPDNFAKREILSLIVRCSNPGCTSKMELRHLENHLASCEFATVPCPHCQQSV
KKTLLEEHTSVQCRRRPVSCPDCVEIFVYEEKERHEQQCPFASVMCPHCDMDLTRDQMES
HCDTDCPKAPIACNFSLFGCKERMQRHDLARHMQDFTQMHMHYMADFLRSLNLNGTIPKS
CSTIVHSVSFEDQGAAASASSCSKGALSSNCTPCQPTEEMQRLREMDRRLVKQDHQLREL
IILKENQTGQIAELRKRVSVLEESMRELESQHCTGIYIWRLKDFSVLLRNQEAGLPVVEH
SPGFYTGRPGYKLCLRLHLQSPVAQRCSNFISLFVHTMQGAYDGLLTWPFQGTIRLAILD
QGPEGQHHIEVMETKPDLQAFQRPTIIRNPKGFGYVTFLHLHHLKERAYVKDDALLIRCE
VTPRFDNMLHRDGVTVQPRGSEASI
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgctttgacagcagcagcaaggggagtttggaggaggacagctgtgatggagct
attggtggagagctctctggctgcgctttggtaatgatggaaaaagaacaggagtctctt
ctaagcccatcagaaagccctggcacctacatgagcggcgcttcatctagttttcatgat
ggcactcaccagcaaggctacgatgtggagtttgatcctcccttagagagcaaatatgag
tgccctatctgtctaatggcgttgaggaatgctattcagacgccctgtggtcatcgattc
tgcaagaactgcattgagaagtccattcgtgacgcgggacaaagatgccctgtggacaat
gaaatgctgtcaaaagagcagctttttcctgataactttgccaagcgggagattctttcg
ctgattgttcgctgctctaaccctggctgcaccagtaaaatggagctcagacatttagag
aatcacttggccagttgtgagtttgccactgtgccttgtccacattgccaacagtctgtg
aaaaagacccttttggaggagcatacatctgtccagtgcagaagaagacctgtatcatgt
cctgactgtgtagaaatttttgtctatgaggagaaagagcgccatgagcagcagtgtcct
tttgccagcgtgatgtgccctcattgtgacatggatctcactagggaccagatggaatct
cactgtgatactgattgccctaaagcccccattgcctgtaactttagcttgtttggatgt
aaggaaaggatgcagcgtcacgacctcgctcggcacatgcaggattttacacagatgcac
atgcactacatggcagattttctacgcagcctcaacctcaatggcacaatacccaaatcc
tgtagtacaatagtacattcggtttcctttgaggatcagggagcggcagcatcagcatcg
tcctgtagcaaaggagctttgagcagcaactgcacaccgtgccagcccactgaggagatg
cagaggctgagggagatggacagacgattggtgaagcaagatcaccaattgcgtgagctt
atcattttgaaagaaaaccagactggtcagattgcagagctcagaaaaagagtgtcagtg
ttggaggagtcgatgagggagctggagtcacagcattgtactgggatctacatctggcgc
ctcaaagatttttctgtcctgctgcggaaccaagaggccggtctgccagtcgtggagcac
agccccggtttttacacaggccgcccaggctataaactgtgcctgcgattacacctgcag
tctccagttgcccagcgctgttccaactttatctccctctttgttcacaccatgcaagga
gcctatgatgggctgctgacctggccgttccagggcaccatccgcctcgctatcctggat
caaggccctgaaggccagcaccacattgaggtaatggagaccaaaccagacctgcaggcc
ttccagaggcccaccatcatccgtaatcccaaagggttcggctacgtgacgtttctacac
ttacatcatctgaaagagagggcgtatgtcaaagatgatgctctgcttatccggtgcgag
gtcacaccacgttttgataacatgcttcaccgggatggagtaacggtacagccaagagga
tctgaagcctctata
DBGET
integrated database retrieval system