Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018618G001
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Entry
GSTEN00018618G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08362
thyroid hormone receptor beta
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00018618G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00018618G001
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tng03310
]
GSTEN00018618G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
GSTEN00018618G001
Nuclear receptors [BR:
tng03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
GSTEN00018618G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
CpXC
Motif
Other DBs
NCBI-ProteinID:
CAG00249
UniProt:
Q4SGI3
LinkDB
All DBs
Position
undetermined
AA seq
404 aa
AA seq
DB search
SGYVPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYQGKCVI
DKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRREELQKTVWERLE
PTQEEWELIRMVTEAHMATNAQGNHWKQKRRFLPEDVGQASVVNTPDGNKVDLEAFSQFT
KIITPAITRVVDFAKKLPMFCEVGARLMAELAAAARASNGRLLFLLLLLSAALRRPDHPV
ERLLHGDHVAASRRALRPRERDADAQRRDGGHAGPAEERRPGRGLRRHLRPGRVAVLLRP
GRLGGGPAAGHHPAVLRSAGPEQRGADRALPGGVPAGLRTLHQPPQTQSAAFLGQAADEG
DGPAHDRRLPRQPLPPHEGGVSHRALPAPLPGGLRGLRTPPTLC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
tcagggtacgttcccagttacctggacaaggacgagctctgcgtggtgtgcggggacaag
gccaccggctaccactaccgctgcatcacctgcgagggctgcaagggcttcttcagacgg
accatccagaagaacctcaaccccacctacgcctgcaagtaccagggcaagtgtgtgatc
gacaaggtcaccaggaaccagtgccaggaatgtcgcttcaagaagtgcatcgccgtgggc
atggccaccgacctggtcctggacgacagcaagcggctggccaagcgcaagctgatcgag
gagaaccgggagcggcgccggcgggaggagctgcagaagacggtgtgggagcggctggag
cccacgcaggaggagtgggagctgatccgcatggtgaccgaggcccatatggccaccaac
gcacaggggaaccactggaaacagaagaggagattcctgcctgaggacgttggtcaagcg
tccgtggtcaatacgcccgacggaaacaaagtggacttagaagccttcagtcagtttaca
aaaataatcacccccgccatcacccgcgtggtggactttgccaaaaaactgcctatgttc
tgtgaggtaggcgccaggctaatggctgagctggcggcggcggcgcgggcgtctaatggc
cgtctcctcttcctcctcctcctcctctcagctgccttgcgaagaccagatcatcctgtt
gaaaggctgctgcatggagatcatgtcgctgcgagccgccgtgcgctacgaccccgagag
cgagacgctgacgctcaacggcgagatggcggtcacgcggggccagctgaagaacggcgg
cctgggcgtggtctccgacgccatcttcgacctgggcgtgtcgctgtcctccttcggcct
ggacgactcggaggtggccctgctgcaggccatcatcctgctgtcctcagatcggccggg
cctgagcagcgcggagcagatcgagcgctaccaggaggagttcctgctggccttcgaaca
ttacatcaaccaccgcaaacacaaagtgccgcatttctgggccaagctgctgatgaaggt
gacggacctgcgcatgatcggcgcctgccacgccagccgcttcctccacatgaaggtgga
gtgtcccaccgagctcttcccgcccctcttcctggaggtcttcgaggactgaggacacca
cccactctgtgttag
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