Tetraodon nigroviridis (spotted green pufferfish): GSTEN00021756G001
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Entry
GSTEN00021756G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06588
integrin beta 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04145
Phagosome
tng04148
Efferocytosis
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04810
Regulation of actin cytoskeleton
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00021756G001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00021756G001
04148 Efferocytosis
GSTEN00021756G001
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00021756G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00021756G001
04810 Regulation of actin cytoskeleton
GSTEN00021756G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00021756G001
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00021756G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
GSTEN00021756G001
Cell adhesion molecules [BR:
tng04515
]
Integrins
Integrin beta subunits
GSTEN00021756G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_2
I-EGF_1
Integrin_b_cyt
Motif
Other DBs
NCBI-ProteinID:
CAG02605
UniProt:
Q4S9S7
LinkDB
All DBs
Position
2
AA seq
823 aa
AA seq
DB search
GLNICTGGSATSCQECLLIHPSCAWCAQDVRLPNLALVIKSQPIVFGVSEVPANANIRIY
LSFQDFGQRKTLTSRCDFEQNLVKRGCDQRFVESPSSSISVLQNVPLSSKGVSQYDVVQI
MPQKMALSLRPGRCPVREDWCLFPEKPEIKAAKMVSKRLLRVFAPSGGQTWFQLQVRQVE
DYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAYEMGKLTSNFRLGFGSFVDKNMSPFSYTA
EKYRENPCNGYKPFPNCVPTFGFRHILPLTDKVDSFNVEVQKQMVSRNRDAPEGGFDAIL
QAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGRLGGLVEPHDGQCHLDDGSEYSASTKM
DYPSLALLGEKLAENNIFLIFAVTKQLYIIYKNFTALIPGTTVEILDQDSKNVIQLIIAA
YNNIRSKVELSVWDHPEDLSLSFTATCQDGMPLPGLKKCADLKIGDTVSFNVSVEARSCP
PRGANHSFTIKPVGFKDRLEVSVDYRCDCGCSEVAQVNSSVCNSTGTYNCGICHCEPGYL
GAHCECQESEASTIYLNACRGAEGKQVCSGRGKCSCNQCLCYESEFGKIYGSFCECDDFS
CARHKGILCSGHGECHCGECKCHAGYVGDNCNCSTETSSCISDDGQMCSGRGSCVCGRCQ
CTEPGSFGDTCEKCPTCPDACDTKRKCIECRLFNSGGFTDNQTCQRLCKDEIITVETLNT
DDRNAVLCLYKTDDNCVMKFTYSEHTSGQSILTALKEPECGTGTNVLMVLLAVVGSILLV
GVVLLAAWKLVITVHDLREFSRFQSARSRARYEMVRMDNPGVI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
ggtctcaacatatgcaccggcggtagtgctacgagctgccaggagtgcctcctcattcac
cccagctgcgcctggtgtgcgcaagacgtacgtctaccaaatcttgccctagttatcaag
tctcagccgatcgtttttggcgtctcagaagtcccagcgaatgctaacatcagaatttat
ttgtcctttcaggacttcggccaaaggaagaccctgacatcgcggtgtgatttcgaacag
aacttggtcaaaaggggctgcgaccagcgcttcgtcgagagccccagcagtagcatctcc
gtcctgcagaacgttcccctcagttccaaaggtgtgtcccagtatgacgtcgtccagatc
atgccccagaagatggccctcagcctgcgacctggtaggtgtccagtcagggaggactgg
tgtttgttccctgaaaaaccagagatcaaagcggccaagatggtttccaaacgtctcctt
cgggtgtttgctccctcaggaggccagacgtggttccagctgcaggtgcggcaggtggag
gactacccggtggatctgtactacctgatggacctctccctctccatgaaggatgatctg
gacaccatccgtaacctgggcaccaagttggcctatgagatgggcaagctcaccagcaac
ttcaggctgggcttcggctcctttgtggacaagaacatgtcccctttctcctacacagcc
gaaaaatatcgggagaatccctgcaacgggtacaagccgttccccaactgtgtccccacc
ttcggcttccgccacatcctcccgctgaccgacaaggtggacagcttcaacgtggaggtg
cagaagcagatggtgtctcgcaaccgcgacgcgccggagggcggcttcgacgccattctg
caggctgcagtttgcaaggagaagatcggctggaggaaggaggcctaccacctcctggtg
tttgccactgacgacgtgcctcacctcgccctggacgggaggctgggaggcctggtggag
ccccacgacgggcagtgtcacctcgacgacggcagcgagtacagcgcctctaccaagatg
gattatccctctctggcacttctgggagaaaagctggcagaaaataacatctttcttatc
tttgcagtgacaaaacagctgtatatcatttacaagaacttcactgcgctaatacctgga
accacggtggaaatcctggaccaggactccaagaatgtgattcagttgatcatcgcagct
tataataacatcaggtctaaagtggagctctcggtttgggatcatcctgaggacctcagc
ctttccttcactgccacctgccaggatgggatgccactgccaggcttgaagaagtgtgca
gacctgaagataggcgacaccgtttcatttaatgtgagtgtggaagccagaagctgccct
cctcgtggtgccaaccacagcttcaccatcaagccagtgggcttcaaagatcgcctggag
gtgtctgtggattatcgctgtgactgtggctgcagtgaggtggctcaagtgaacagcagc
gtctgcaactccacaggcacctataactgtggcatctgccactgtgagccgggctacctg
ggcgcccactgtgagtgccaggagagcgaggccagcaccatttacctgaacgcctgccgg
ggagcagagggcaagcaggtctgcagcggacgagggaagtgtagctgcaaccagtgtctg
tgctacgagtccgagtttgggaagatctacggcagcttctgcgaatgcgacgatttctcc
tgcgcccgccacaaaggcatcctctgttcaggtcacggcgagtgtcactgtggggaatgt
aaatgtcacgccggttacgtcggtgacaactgtaactgctccaccgagacgtcttcgtgc
atttctgacgatgggcagatgtgcagcgggcggggcagctgcgtgtgtggtcgctgtcag
tgcacggagccgggttcgttcggagatacctgtgagaaatgccccacctgccctgatgcc
tgcgacactaagaggaagtgtatcgagtgccgcctcttcaactctggagggtttacagac
aaccaaacctgccagcgcctgtgcaaggatgaaatcatcaccgtggaaactctcaacacg
gacgaccgcaatgccgtgctttgcctgtacaagactgatgacaactgtgtgatgaagttc
acatattccgagcacaccagcggacagtccatcctcacagcgctcaaagagccagagtgt
ggcactgggacaaatgtcctaatggttctgctcgcggtggtgggcagtatcctcctggtg
ggagtggtactgctggcggcctggaaattggtcatcaccgttcacgacttgagagagttt
tcacgcttccagagtgcacgctcacgtgcccgatatgagatggtaaggatggacaaccca
ggggtgatctaa
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