Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027450G001
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Entry
GSTEN00027450G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04250
rhodopsin
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
GSTEN00027450G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tng04030
]
GSTEN00027450G001
G protein-coupled receptors [BR:
tng04030
]
Rhodopsin family
Vision
Opsin
GSTEN00027450G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
Srg
7TM_GPCR_Srx
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
Motif
Other DBs
NCBI-ProteinID:
CAG06941
UniProt:
Q4RXE1
LinkDB
All DBs
Position
11
AA seq
349 aa
AA seq
DB search
MVWDGGIEPNGTEGKNFYIPMSNRTGIVRSPFEYPQYYLVDPIMFKMLALYMFFLICTGT
PINGLTLLVTAQNKKLRQPLNYILVNLAVAGLIMCAFGFTITITSAINGYFILGATACAV
EGFMATLGGEVALWSLVVLAIERYIVVCKPMGSFKFTGTHAAVGVLFTWIMAFACAGPPL
FGWSRYLPEGMQCSCGPDYYTLAPGYNNESYVIYMFVVHFFVPVFLIFFTYGSVVLTAAA
QQQESESTQKAQREVTRMCILMVLGFLVAWTPYATFSGWIFMNKGAAFHPLTAALCAFFA
KSSALYNPVIYVLMNKQFRNCMLSTIGMGGAVDDETSVSASKTEVSSVS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggatggaggaattgagcccaatggcacagaaggaaagaacttctacatccct
atgtccaacaggactgggattgtcagaagtccttttgaataccctcagtattatttagta
gatcccatcatgtttaagatgctggcgctttacatgtttttcctgatctgcactgggact
ccaatcaacggcctgacattgctggtgacagcccagaacaagaagctccggcaacctctc
aactacatcctggtcaacctggcagtggctggactgatcatgtgcgccttcggattcacc
ataaccatcacttctgctatcaatggctacttcatccttggagctactgcctgcgctgtt
gagggattcatggctacacttggaggtgaagttgctctctggtcactggtggtcttggcc
attgagagatacattgtcgtctgcaaacctatgggcagcttcaagttcactggcactcac
gctgcagttggagtccttttcacctggatcatggcttttgcttgtgctgggccccctctc
tttggctggtccaggtacctcccagagggcatgcagtgctcctgcggacctgactactac
accctagctccaggctataacaacgaatcctatgtcatctacatgttcgttgtccacttt
tttgttcccgtcttcctcatctttttcacttacggaagtgtggtgttgaccgctgcagcc
cagcagcaggagtcagagtccacccagaaagctcagagggaagtgacacgcatgtgcatc
ctgatggtcctcggcttcctcgtggcctggaccccctacgcaactttcagcggatggatc
ttcatgaacaagggagctgccttccatcccctaacagcagctctttgcgccttctttgcc
aagagctcagccctctacaaccccgtcatctacgtgctgatgaacaaacagttccgtaac
tgcatgctgagcacaattggaatgggcggcgcggtggatgatgagacctcggtgtctgcc
agcaagacagaggtgtcttctgtgtct
DBGET
integrated database retrieval system
