Thioalkalivibrio nitratireducens: TVNIR_2601
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Entry
TVNIR_2601 CDS
T02408
Symbol
ddl_[H]
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00470
D-Amino acid metabolism
tni00550
Peptidoglycan biosynthesis
tni01100
Metabolic pathways
tni01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TVNIR_2601 (ddl_[H])
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TVNIR_2601 (ddl_[H])
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TVNIR_2601 (ddl_[H])
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tni01011
]
TVNIR_2601 (ddl_[H])
Enzymes [BR:
tni01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
TVNIR_2601 (ddl_[H])
Peptidoglycan biosynthesis and degradation proteins [BR:
tni01011
]
Precursor biosynthesis
Amino acid ligase
TVNIR_2601 (ddl_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AGA34242
UniProt:
L0DZ11
LinkDB
All DBs
Position
complement(2691971..2692915)
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AA seq
314 aa
AA seq
DB search
MTQTAKRAARYGRVAVLMGGWSDEREISLGSGQAVLQALLRQGVDATPIDLTVERARSLD
LLGYDRAFIALHGTGGEDGTIQGCLDIAGVPYTGSGVLGSALGMDKLACKRLWGGTNLPS
APYRLLSADSDPEAVADALGLPLIVKPSRGGSSLGLSRVQSTVELQAAYDEARRHPGAVF
AEQWIVGREFTVAIVANEPLPVIQIETPGNFYDYHAKYEADTTRYRCPPPLDSAALIELQ
TLALSAFAAIDGDGWGRVDLLQDVHGENYLIEVNTVPGMTDHSLVPKAAAQAGIGFDELC
LRILDTSFRAEGAD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacggcgaaacgcgcggcccgctacgggcgggtggcggttctgatggggggc
tggtcggacgagcgcgagatttcgctgggcagcggtcaggcggtactccaggcgctgctg
cgccagggcgtcgatgcgacaccgatcgacctgaccgtggaacgagcccgcagcctggac
ctgctcgggtacgaccgcgcattcattgcactgcacggtaccggtggcgaggacggcacg
atccagggctgcctggacatcgccggagtgccctacaccggttccggagtactcggatcc
gcgctggggatggacaagctggcctgcaagcggctctgggggggaaccaatctgcccagc
gcaccgtaccggctgctgtccgccgactccgacccggaagcggtggccgatgccctgggg
ctcccgctgatcgtgaagccctcgcgcggcggctccagcctgggcctgagccgggtgcag
tccacggtcgaattgcaggctgcctacgacgaggcccgccggcatcccggcgcggtgttc
gcggaacagtggatcgtcggccgggagttcacggtggcgattgtcgcgaacgagccgctg
ccggtgatccagatcgagacacccgggaacttctacgactatcacgcgaagtacgaggcg
gatacgacgcgctatcgctgcccgccgccgctggactcggctgcgctgatcgaactgcag
acgctcgcgctcagcgcgtttgcggcgatcgacggcgacggttggggccgggtcgacctg
ctgcaggacgttcatggcgagaactacctgatcgaggtcaacaccgtccccggcatgacc
gaccacagcctggtcccgaaggccgctgcgcaggccggaatcggcttcgacgaactgtgc
ctgcgcatcctggataccagttttcgcgccgagggggccgattga
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