Trichoplusia ni (cabbage looper): 113491648
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Entry
113491648 CDS
T05757
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113491648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113491648
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113491648
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
RanGAP1_C
BUD22
Motif
Other DBs
NCBI-GeneID:
113491648
NCBI-ProteinID:
XP_026724522
UniProt:
A0A7E5V8A8
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Position
3:6380743..6391240
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AA seq
600 aa
AA seq
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MSTFDFNSINAALSDSGKPTTGVDFSGKSLKLDTANDAKPIVDAINSCPNLQYLTLTGNT
LGVSAAEAISKALQQHPELKVARFSDMFTGRMKTEIPPALAALGDGMITAGARLSVLDLS
DNAFGPIGVEGLAKLLQSDVCSELEELRLNNNGLGITGGRLLAKALGARPRKLKIFIAGR
NRLENDGATALAKVFQNMGTLEELAMPQNGIYHVGISALSQAFKRNSQLARLNLNDNTVG
AKGAAAIADALPNLKDLKSINFGDCLLKSKGAKALAKAFKDNSLLLESLDLSHNEIGREA
CMEVVDAITALPDSNDRLSRVVLAGNSLGGVGNKKTMRDKLGACAELSDGEGSEDEYVTD
SEEDNSGSDDDDGDDDGEQNSEDSATEDAQHHDSSADFAKEITLDTSGVEEVETDVGRFL
LQPTAENLDRLGDNAVDVIDAHLQSIQDPAALIQAYVDATFCVCGLSLTHARAAALGPHM
FPLLVKRAQQQRAAAWLLANSMLTALGLIKEEDSSWEWSGQLLPTSSGDAPHPTDSRGEG
ASPDKSEDKNRRIRWSLGPCYAALSRCIDAPYFPSALRDTLRFFAQSKKNTIPYAEQLCR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatttgattttaattcgatcaacgcagctttatctgactccggcaagcctaca
actggtgtagacttttctggaaaatcgttaaaattggacacagcaaatgatgcaaaaccg
atagtagacgcaatcaactcatgtccaaacctccaatacttgacactgacggggaacacc
ctcggggtgtctgcggccgaggccatctccaaagctctgcaacaacaccctgagctgaag
gtggcgaggttctcggatatgttcactggacggatgaagacggagatacctccagccttg
gctgcccttggagacggcatgataacagccggtgccagactcagcgtgttggacctcagt
gacaacgcctttggacctattggagttgagggactagcgaagctcttacaaagtgatgtg
tgcagtgagttggaggagcttagactgaacaacaacggtctgggtattaccggcggccgg
ctgctggcgaaggcgctcggagcccggcctcgcaagctcaagatattcatagctggaagg
aacaggctggagaacgatggagctactgcactcgctaaagtgtttcagaacatgggcact
ctggaagagctagcgatgcctcagaacggcatctaccacgtgggaatatcagctctgtcg
caagccttcaagaggaactcacagctcgccagactcaaccttaacgataacacggtgggc
gctaaaggggccgccgcaatagctgacgctttacctaatctgaaagacctgaaaagcatc
aattttggagactgtctgttaaaaagcaaaggcgctaaggctctagcgaaggctttcaaa
gacaactcactacttctagagtctctggacctaagtcacaacgagatcggtcgcgaagcc
tgtatggaggttgtagatgctatcacagctctaccagatagtaacgatcgtctcagcaga
gtcgttttagctggcaacagtttaggcggcgtcggtaataagaagaccatgagagacaag
ctcggggcctgcgcagagctcagcgacggagaggggagcgaggacgagtatgtaacagac
tcggaagaagacaactcaggttccgatgatgatgacggtgatgatgatggtgaacagaac
tcggaggacagtgccacggaggacgctcagcatcacgacagtagcgcggacttcgcgaag
gagatcacactcgatacctcaggagtggaggaggtggagacagatgtaggcaggttcctg
ctgcagccgaccgctgaaaacctagacagacttggagacaacgccgtggacgtgatagat
gcacatttacagtcgatacaagacccggccgctctcatccaggcctacgtggacgctacc
ttctgtgtgtgcgggctgtcgctaacacacgcgcgggcggccgcgctaggcccacacatg
ttcccactgctggtcaaacgtgcccagcaacagcgggccgctgcctggctactggccaat
tccatgttgacagcgctgggattgattaaggaggaggacagcagctgggagtggtcaggc
cagctcctgccgacctcctccggagacgctccccatccgactgacagccgcggggagggt
gcttcacctgacaaatctgaagacaagaaccgccgtatacgctggtccctaggcccttgc
tacgcggccctctcccgttgtatcgacgcgccatacttcccgagcgccctgcgagacaca
ctaagattctttgctcagagcaagaagaatacaataccatatgctgaacaattgtgccga
taa
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