Trichoplusia ni (cabbage looper): 113493248
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Entry
113493248 CDS
T05757
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113493248
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113493248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
113493248
NCBI-ProteinID:
XP_026726923
UniProt:
A0A7E5VF55
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All DBs
Position
4:complement(16066484..16070806)
Genome browser
AA seq
1022 aa
AA seq
DB search
MSKQGKRKITVELPKSKDLANRPSVFERLGTKKSSAKKTTEHCRQWAQNGSCAYGKSCKF
ASTHTLISPSKQRAANKDSEHKRAVKDDPKSRLHSTVVVRSGRSPDGEIDNWDQNDLEYA
DTDVLEKRRQQLQRELELQMKMDSNKDIRKEKKKTMSSTSSSRSSSSSSVSSSSSDNSSS
SSSSGREARRKAKKGKLKRNSSSSSDGDAPSKKKFVKTDNLKRDKSEPKKTGVKKDDRAL
KKQDAMKKKPVTKTTIGKKSLSPGKKSGGTPPITSKSVNKSSVKHGKSPPRRDRNRSASP
HRDKERDRTKEKEREKDREKEREKERERTRVRSRSPRKGRSRSPRQHASHSKDVRKKESS
ERSRPVSPKKAARRDASAERHRKRSASRERDRGRDHKDRSMERRKDKHDDKDRHDRKDRG
GRDRNKDSKRDDSKRRGRERGLGGRGAANKGLEKPNKPMERLLPRPEERLAALAAISNRA
LDIDKNSSTSKDRQDSHSERGGRKQDRLERDRSTKRDRMDSMDRDQGEYDMGLDRQYDND
RNLDHYDRVDDRYDDVPREEDRSPGYIQGRERHYDSSYEMSGPPRGYPEDDERLYGEHMG
DHRGVDMGYDDRRPHRDRSWERRSGSMDRERGYLHPHKEWDNDDYRSGDWGRERHWSMHE
SQMNEWGDKEPDVDAWHHRGHPSGPHRGRMHDDYGRGMRMDLLRGEGGKRRGPRNEPEQT
VKEAPPSTQTTSSVPPRSEAEVDDKPIPDDLSEISDDPDDILNREDMTDQVMDEESQSAL
PNDENVSKPDGSEKESTQDTSGAGEERESQDAKDEEDVANLDFEEISDGELEEERTRAGL
GDALGVDWASLVADVRRREQTSVSSGGARERWRPERVLARLGLSINMAGKEIVQDVIEKN
AESLHTEKKNAQATENPDQKDIVEQNGIHENEEKPENVPDISTLHPVAAIQVAVQKRKRQ
RAVLFGSGCEITRGLSARRDLALRRYLCHLPTAERMGQSRVTPQPSLFHAARSLLMHAPV
TG
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaggaaaaagaaaaattactgtcgaattaccgaaatccaaagatctagct
aacaggccaagtgtgtttgagcgcctcggtactaagaaatcaagcgctaaaaaaacaact
gaacattgtagacagtgggcacaaaacgggagctgtgcttacggtaaaagttgtaaattt
gcatcaactcatacgttaataagtccgtcgaaacagcgcgcagcaaacaaagatagtgaa
cacaaacgtgccgtgaaagatgaccctaaaagtaggcttcattcaaccgtggtcgtgcga
tcaggtcgtagtccagacggtgaaatcgacaattgggatcaaaatgacctagaatacgca
gacacagacgtccttgaaaaaaggcgacaacaactgcaaagggagttagagttgcaaatg
aaaatggactccaacaaagacatacgtaaagaaaaaaagaaaaccatgtcaagcacttcc
tcatcacgcagttctagttcttccagtgtctcgtcatcatcttcagacaatagctcatcg
tcatcgtcatctggcagagaagcaaggcgaaaagcaaagaaaggaaagttaaaaagaaat
tcaagttcttcatcagatggagatgcaccttctaaaaagaaatttgtcaaaactgataat
ttaaaaagagataaaagtgaacctaaaaaaacaggtgtaaaaaaagatgacagagccttg
aagaaacaagatgctatgaaaaagaaacctgttacaaaaactaccattggaaaaaaatca
ttatcaccaggcaaaaaatctggtgggactccaccaattacatctaaaagtgttaataaa
agtagtgtaaaacatggtaagtcacctccaagaagagatagaaacaggagtgcatcccct
catagagataaagagagagatagaacaaaagaaaaagaaagagagaaggacagagaaaag
gaacgtgaaaaagaaagagaacggactagagttcgaagcagatcccctagaaaaggtagg
tctaggtctccacgacagcatgcttctcattcaaaagatgttcgcaaaaaagagagttcc
gaacgtagcagaccagtatcacctaaaaaagcagctcgtagagatgctagtgcagaaagg
catagaaaaagatctgctagccgagaaagagatagaggtcgtgatcataaagatcgatca
atggagaggcgaaaggataaacatgatgataaagatagacatgataggaaagacaggggt
ggtcgggacagaaataaagatagtaaaagggatgacagtaaaagaagagggcgtgaaagg
ggcttgggtggcagaggagctgctaataagggattagaaaagccaaacaagcctatggaa
cgacttcttcctagacctgaggagcgtttagcagcacttgctgctatttctaacagagct
cttgatattgataaaaattcgtcaacttcaaaagaccgacaggactcacattctgaaagg
ggtggtcgtaaacaagataggctcgaaagagatcgctctacaaaaagggatagaatggat
agcatggacagagatcaaggtgaatatgatatgggtttagatcgtcagtatgacaatgat
cgcaacttagatcattatgacagagtagatgatcgttatgatgatgttcccagagaagaa
gacagatctccaggttatatacagggaagggaacgacattatgactcaagttatgaaatg
tcaggtcccccaaggggatatcctgaagatgatgaaaggttatatggtgaacatatggga
gatcatagaggtgttgatatgggttatgatgaccgccgtccacatcgcgatcgctcttgg
gaaaggcgttcaggttccatggatcgtgagcggggatatctacatcctcacaaagaatgg
gacaatgacgattatcgttcaggagactggggtagagaaagacactggtcaatgcatgag
tcacagatgaacgagtggggtgataaagaaccagatgtggatgcttggcatcatagaggt
catccttctggacctcaccgggggcggatgcatgatgattatggacgaggaatgagaatg
gatcttcttcgaggtgagggtggtaaacgacgtggtcctcggaatgagcctgagcaaact
gtaaaggaagcaccaccttcaacacaaacaacatcctcagtaccaccacgttcagaggct
gaagttgatgataaaccaatacctgatgatctaagtgaaatcagtgatgatcctgatgat
atactgaacagagaagatatgactgatcaagttatggatgaagaaagtcaatctgcttta
ccaaatgatgaaaatgtatctaaaccagatggctctgaaaaggagtcgacacaagataca
agtggtgcaggtgaagaaagagaatcacaggatgctaaggatgaggaagatgttgctaat
ttagactttgaagagatatctgatggcgaactggaagaggaacgtacaagagctggacta
ggtgacgctctaggagtagactgggccagtttagtagcagatgttcgtcgacgagagcaa
actagcgtgtcttccggcggcgcacgtgaacgctggagacccgagcgagttcttgcacgc
cttggactttctataaatatggctggaaaggaaatagtacaagatgtcattgagaaaaat
gccgaaagcttacacacagaaaagaaaaatgcccaagcaacagaaaatccagatcagaaa
gatattgttgaacaaaatggtattcatgagaatgaagaaaagcctgagaatgtacctgac
atatcgacattacacccagtggcagctattcaggtggctgtacaaaagagaaagcgtcag
cgcgctgtattgtttggatctggttgtgaaataactcgaggacttagtgcaagaagagat
ctagctttgcggcgatatttgtgtcatttacccactgctgaaagaatgggacagtcacgt
gtgacaccacagccttcactatttcatgctgctagatctctcttaatgcatgctcctgtc
acaggctga
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