Trichoplusia ni (cabbage looper): 113494229
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Entry
113494229 CDS
T05757
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113494229
03041 Spliceosome [BR:
tnl03041
]
113494229
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113494229
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113494229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
DUF1897
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-GeneID:
113494229
NCBI-ProteinID:
XP_026728272
UniProt:
A0A7E5VJ04
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All DBs
Position
5:6517477..6530593
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AA seq
714 aa
AA seq
DB search
MSDYSSMATLQNNSQTAGFAAAVQRARLVAAKLEGGGSKRPLEEGPEPNAKKLASVEVAY
QQQQQMSAPSAVAVVSRAAAPPASAAPPPPPNAGAGSLMPDQTLNEYIRVPDKMVGLIIG
RGGEQITRLQAESGCKIQMAPDSGGQPDRLCTLTGSREAILRAKELVNQIVNHRGRENAP
QHGEGAGAGGGPGMPPPPPRGAQGSMAQEEIMLPGPKVGLIIGKNGKTIKQLQEQSGAKM
VVIQDGPNTEYEKPLRISGDPAKVEHAKQLVYELLADKDMQQGGGPRPPPYDDNYAGHDQ
GNGLATNSTEVLVPKVAVGIVIGRGGDMIKKIQAETGCRVQFHQERDDGPNDKRCYLQGK
PHQVDQARQMIEDLISSVNRREQEVRAGRGRGGAAARNGERGAGDYAAWQDAQEIRVTFT
VSNVKCGLIIGRGGEVIKQINAESGAHCELDRRAQGSDRNNRTFYIRGHPEAVDHCKRII
MEKVGMPVNFIQEGSNGGNGGNGNGNGNGGNGGEYYGGGGGGGPPAWGYNPHWHQPAQQQ
APQQQVQINPATGQPDYSQQWIDYYRSLGLMREAEAIEQQAKQQQQQQQQQPQPGGGGGN
GGGTPPASGATPAPPAGGSQPDYSAQWAEYYRSIGKLKEAEAIEQQIKMKSSGAIGGGGG
GGSSTPGGGAAGAGAAGGAGAGGQYAQYGVYAPAVYPAYQPYPAYPQPNAEHHQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattattcttctatggctacgcttcaaaacaatagccaaacggcgggatttgcg
gctgctgtacaacgtgctagattggttgctgctaagctagaaggaggtggaagcaagagg
cctttggaggagggacccgaaccgaatgcaaagaagttagcgtccgtcgaagtcgcgtat
caacaacaacaacaaatgagtgcaccatccgccgtagcggtcgtgagccgtgccgcagcg
ccgccggcgagcgcggcgccgcccccgccgcccaacgcgggcgccggcagcctcatgccc
gaccagacactcaacgagtacatcagggtgcctgacaagatggttggacttattatcgga
cgcggaggtgagcagataacgcgcttgcaggccgagtctgggtgtaagatacagatggcg
cccgactctggtggccagcccgacaggctgtgcacgctcacgggatccagggaggcgata
cttagggctaaggaactggtgaaccaaatcgtgaaccaccgcggtcgtgagaacgcgccg
caacacggcgagggagcgggcgcgggcggcgggcccggcatgccgccgccgccgccgcgg
ggggcgcagggctccatggcgcaggaagaaataatgctgccgggacccaaggtgggcctg
atcattggcaagaacggcaaaactatcaaacaacttcaggagcaatccggagctaagatg
gtcgtcatacaggatggtcctaacacagaatatgagaagcctctgcgtatatctggtgac
ccggcgaaggtggagcacgcgaagcagcttgtgtacgagctgctcgccgacaaggacatg
cagcagggcgggggcccgcgcccgccgccatacgacgacaactacgccggccacgaccag
ggcaacgggctcgctaccaactccacagaggtactagtacccaaagtcgcagtcggtatc
gttattggtcgcggcggagacatgatcaaaaagatccaagctgaaactggatgcagagtg
cagttccaccaggagagagatgacggacccaacgacaagagatgttatctgcaaggcaag
ccacaccaggttgatcaagccaggcaaatgattgaggatctcatctcaagtgttaatcgg
cgcgagcaggaggtccgcgcggggcggggacgcggcggcgcggccgcgcgcaacggcgag
cgcggcgccggggactacgcggcctggcaggacgcgcaggagatacgggtcaccttcacc
gtgtccaacgtcaagtgcggactcatcatcggcaggggtggtgaagtaattaaacaaata
aacgcggagtctggcgcgcactgcgagctggaccggcgcgcgcagggcagcgaccgcaac
aaccgcaccttctacatccgcggacatcccgaggctgtcgaccactgcaagcggatcatc
atggaaaaagttggcatgccagtgaacttcatccaagagggttcaaatggtggcaacggt
ggcaatggcaacggaaacggtaatggcggcaacggtggcgagtactacggcggcggcggc
ggcggaggcccgcccgcctgggggtacaacccgcactggcaccagcccgcgcagcaacag
gcgccgcagcaacaagtccaaatcaacccagcgacaggccagcctgactactcgcagcaa
tggattgactactaccgctcgctggggctgatgcgagaggccgaagctattgaacagcag
gccaagcagcaacagcagcaacaacaacaacaaccgcagccaggcggcggcggcggaaac
ggcggcggcactcccccggcgtcgggcgccacgcccgcgccgcccgccggcggctcccag
cccgactacagcgcgcagtgggccgagtactaccgcagcatcggcaagctcaaggaggcc
gaggccattgagcagcagatcaaaatgaagtcgagcggcgctatcggcggcggcggcggc
ggcggcagctcgacgccgggcgggggcgcggcgggcgcgggcgcggcgggcggcgcgggc
gcgggcggccagtacgcgcagtacggcgtgtacgcgcccgccgtgtaccccgcctaccag
ccctaccccgcctacccgcagcccaacgccgagcaccaccagtag
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