Trichoplusia ni (cabbage looper): 113494608
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Entry
113494608 CDS
T05757
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113494608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113494608
Spliceosome [BR:
tnl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113494608
Complex C
U4/U6.U5 tri-SnRNP related factors
113494608
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
113494608
NCBI-ProteinID:
XP_026728829
UniProt:
A0A7E5VKM9
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Position
5:14040701..14044075
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AA seq
337 aa
AA seq
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MSEVEEFNQQKPAKTGKQHNILPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEV
VDEIYYQVKHLEPWERGSRKTAGQTGMCGGVRGVGAGGIVSTAFCLLYKLYTLRLTRKQV
NGLLQHSDSPYIRALGFMYIRYTQPPADLFDWYADYLDDEEEIDPRAGGGGTSTIGALVR
QMLIKLDWFSTLFPRIPVPIQKLIEQKLAEHNRNTAPAKPPVANFRGQCSSNGGNSGAGA
GPGAATNYNPTRVDADRREHDDRDRRDYGDNDRYTKDKTRRDDRDRERDRDRDRERGDRG
DRDRERRSRDRRDRHRDRSRSRDRQRHRSRSRDRRYR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtagaagagttcaatcagcaaaagcccgcgaagacgggaaagcagcataac
atattaccaatatggggtaatgaacagactatgaacctgaacccactaatattagcgaat
atacagggctctagctacttcaaagtgcacctattcaagttgaagacctaccatgaagtg
gtggacgagatttactaccaggtgaagcacctagagccgtgggagcgagggagccgcaag
actgcgggccagacgggcatgtgtggcggcgtgcgtggtgtaggtgctggtggcattgtg
tcaacagcattctgccttttgtacaaattgtacactctgcgtctgactcgcaagcaagtc
aatggcttgttacaacactctgactcaccctacatcagagctcttggattcatgtacata
cgctacacacagcctcctgcagacctgttcgactggtatgccgactacttggatgatgaa
gaagagatagacccgcgcgcgggaggcggcggcacttcgaccattggtgctctcgtgcga
caaatgctcatcaagcttgactggttcagcacgctttttcccagaatacctgtacctatt
cagaagctgattgaacaaaagttagccgagcacaacaggaacacggcaccggcgaaacct
ccggtggccaacttccgtggccagtgtagcagtaatggcggcaatagtggtgcgggcgcg
ggaccaggagcagcgacgaattacaacccgactcgggtcgacgcggaccgcagggaacat
gacgatagagacaggcgtgactacggtgacaatgatagatatacaaaagacaaaacgaga
cgcgacgaccgcgatagagagcgtgaccgcgacagagatcgtgaacgtggcgatcgtggc
gaccgcgaccgagagcggcgttcgcgggaccgccgtgaccggcaccgcgaccgctcgcgg
tcacgtgaccgccagcggcacaggtcgcgctccagagatcgccgctacagataa
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