Trichoplusia ni (cabbage looper): 113508453
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Entry
113508453 CDS
T05757
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113508453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113508453
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113508453
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
113508453
NCBI-ProteinID:
XP_026747322
UniProt:
A0A7E5X0P3
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Position
2:16955518..16958816
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AA seq
590 aa
AA seq
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MSIKRQATTELNHDNWDKEDPADHEEMGSFKIATKDILEKRVIRTAKRRSQLGGDEPKKS
VFSGFSGFASKPPPSSFDFLSKLTNGSNDNSSSSKVDSSVTSSLFTSKPIASSPSSGIFG
IQSTTSPAKSPFGSPSTQTGTGGLFGVSSPNTTSTPSMFITSKADSTVKDSPFKIQTVTS
STDNNTDSTKSSMAPVTSTKFDIPSTSANVAKSLFSTTSNTTPFKIQPSLNAHTATNNFG
TPSKPESKTTDADKKSEDTKDESKMKYYSKLKGLNESVSDWIKKHVEQTPLCILTPIFKD
YEKYLKEIQNEYQSPDEESITKSDDKDTTSEPKSEIKLPTTDTPKPAIGSSIFNTSQNSK
SLFGNQSSSTSAGEKSGSFSFGIGSSTNTSSTITTSSAGFSFGAITSSTGSATTSSSPFS
FATTTSTASTNGTAAPFSFGIGKPFSFNSNIKQNTENTEEKNDNEDEDTPPKVEFTPVVE
ENSVFEKRCKVFVKKDGNFVDKGVGTLYIKKIEETGKHQLLIRANTNLGTILVNMILASA
IPTQRMGKNNVMFVCIPTPDSKPPPTPILIRVKTTEEADQLLETLNKYKT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaagcgacaagccactactgagttaaatcacgataactgggataaagaggac
ccagccgaccatgaggaaatggggagttttaaaattgcaaccaaagacattcttgagaaa
cgtgttatcaggactgcaaaaaggcgttctcaacttggtggagatgagcctaagaaaagt
gtcttcagtggattcagtggttttgccagcaaaccaccaccatcatcttttgacttctta
tcaaagttaaccaatggcagcaatgataacagttcttctagcaaagtggattcatcagtc
acttcaagcttatttacaagtaaaccaattgcaagcagtccaagtagtggtatttttggt
attcagtcaacaacttcaccagctaaatctccatttggttcaccatctacacagactggt
acaggaggtctgtttggagtttcatctccgaatactacttcaactccttctatgtttatt
acatccaaagctgattccactgtcaaggactctccattcaaaattcaaactgttacaagc
tcaactgataacaatactgattcaactaagtcttctatggccccagttacttccactaaa
tttgacattccatctacaagtgctaatgtagctaaatccttgttttcaactacttctaac
accactccatttaaaattcaacccagtttaaatgcccatacagctacaaacaattttggc
actccatcaaaaccagaatctaaaacaactgatgcagacaagaaatctgaagacacaaaa
gatgaaagcaaaatgaaatattactcaaagctaaaaggactcaatgaatctgtatcagat
tggattaagaagcatgtcgagcaaactcctctatgcatactcacaccaatatttaaggac
tatgaaaagtatttgaaggaaatacaaaatgaatatcaaagtccagatgaggaaagcatt
acaaaatctgatgacaaagacacaacatctgaaccaaaatcagaaataaaattgccaaca
actgatacacctaaacctgctattggttcatccatctttaatacatcacaaaattctaaa
tcattatttggtaatcaaagtagttccacctcagcaggggaaaagtcaggctctttttct
tttggaattggttcatctaccaatacttcaagtactataacaactagctctgctggcttt
tcttttggtgctatcacatcaagcactgggagtgctacgacatcttcatctcccttctca
tttgcaactaccacaagcactgcaagtactaatggaactgcagctccattttcatttgga
atcggaaagccattcagttttaattctaatattaaacagaatactgaaaatactgaagag
aagaatgacaatgaagatgaagatactcctcctaaagtggagttcacacctgttgttgaa
gaaaatagcgtttttgaaaagcgttgcaaagtttttgtgaagaaggatggaaatttcgtc
gacaaaggagttggaacattgtacattaaaaagattgaagaaactgggaaacaccagctg
ctgatcagggctaacacaaacttgggcactattttagtcaacatgatattagcatcggct
attcccacacaacgcatgggtaaaaataatgttatgtttgtgtgcatacccactcctgac
tccaagcctccacccacaccaattttaattcgcgtaaagactacagaagaagctgatcag
ttgttagaaactttaaacaaatataaaacatga
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