Thermosediminibacter oceani: Toce_0466
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Entry
Toce_0466 CDS
T01289
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00470
D-Amino acid metabolism
toc00550
Peptidoglycan biosynthesis
toc01100
Metabolic pathways
toc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Toce_0466
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Toce_0466
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Toce_0466
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Toce_0466
Enzymes [BR:
toc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Toce_0466
Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Precursor biosynthesis
Amino acid ligase
Toce_0466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
RimK
ATP-grasp
CPSase_L_D2
BtpA
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ADL07243
UniProt:
D9S1G6
LinkDB
All DBs
Position
complement(465633..466607)
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AA seq
324 aa
AA seq
DB search
MKVGVFWRKFRNVELQLKLSGENIYDDAYEEAYQHFSAIKEAGFDAVMIEWKKDNPQETL
RKVLEEKVDLVFNASSLEEVAFLEAFGIPFAGSGLDLVATDKATRKKIVAYHKLPTPRFI
VVEDPNEIPDHDLKYPLFVKPVRGRGSAGISEENIIERHEDLARVVSKITDKIGQPALVE
EFIRGREITVGIIGYKNPRVLPPVEIEYNSTRTNTFEHKMFDNEIIHCPARLSPEEEEKV
KSTALSIYKVLNAKDFSRIDMILGDDGIPYFLEINTFAGLTMSKDGTHHGYMGYMAKTAG
MTRADFIGSIVRSALERYRICHKL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggggtattctggagaaagttccggaacgtggagctccagctgaaactttcc
ggggaaaacatttacgatgacgcttatgaagaggcttatcagcacttttctgcaataaag
gaagcgggctttgatgcggtaatgatagaatggaaaaaggacaacccgcaggaaaccttg
agaaaagtgcttgaagagaaggtagacctggtgttcaacgcctcatcgctcgaggaagta
gctttcctcgaagccttcggcatccccttcgccggttccgggctggacctggtagcgacg
gataaagccacgcgcaagaagatagtggcgtaccataaacttcccacgccgagatttata
gtggtggaagacccgaacgaaatacccgaccacgacctaaagtacccgctttttgtcaaa
cccgttcgtggccgcggcagcgccggtataagcgaggaaaacatcattgaaaggcacgaa
gacctagcccgggtcgtatcaaagataaccgataaaataggccagcccgcccttgtggag
gaattcatcaggggcagggagataacagtgggaataatcgggtataaaaatccccgggtt
ctgccaccggttgaaatcgaatataattccactagaaccaatacctttgaacataaaatg
ttcgacaacgagataatccactgtcccgcaaggctctcccccgaagaggaggaaaaagta
aaaagcacagcactgagtatctacaaggtcctgaacgccaaggacttttccaggatagac
atgatcctgggggacgacggtatcccgtactttctggagataaataccttcgccggactt
accatgtcaaaggacgggacccatcacggatatatgggctacatggccaagaccgcgggc
atgacgcgggccgatttcatcggctccatagtgagaagcgccctggaaaggtacaggata
tgtcataaattgtaa
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