Thermosediminibacter oceani: Toce_0648
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Entry
Toce_0648 CDS
T01289
Name
(GenBank) transcriptional regulator, CdaR
KO
K02647
carbohydrate diacid regulator
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
toc03000
]
Toce_0648
Transcription factors [BR:
toc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Toce_0648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
DUF2089
GAF_2
HTH_3
HTH_11
Sigma70_r4
GAF
HTH_1
HTH_23
NUMOD1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADL07420
UniProt:
D9S1Z3
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Position
649550..650728
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AA seq
392 aa
AA seq
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MEITHRYAQTIVDRTMKILGYNINIMDSRGIIVGSGDKKRINTFHQGAAEVIRTGKPVEI
TSDMARNLEGVKPGVNLPIYLNDRIVGVVGITGEPAQVRPFGELLKVSVETMLQEAFLAE
QFRAHQNARDLYMYDLIMGNFDDEELFKIRGAALGFDMNLPRVAVAIKVEDLNASNSYAG
ELILQKKREYLLNCIKTAFDNPQNIIGYSGSSSFTVFCVVGETDTRKIKRQVLGYVGRLE
SLLKKDRFRFRAGIGKFHQGLRGLKKSYSEAIRALLIGEKAGNPLSVLFVADVSLEILID
SIPEEVLENFLDNLLPGGQVLEVIKKPKFLQVLRAFFESDLNISTAARRLKISRNTVVNR
LEKIKEITGLNARKLCDALKLKLLLLICELDK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatcacccatcggtacgctcagaccattgtcgacaggaccatgaagatcctcggc
tataacataaatataatggacagccggggaattatagtgggaagcggagataaaaagaga
ataaataccttccaccagggtgccgcagaagtaatcagaaccgggaaacccgtagagata
acttccgatatggctcgaaacctggaaggggtaaagccgggcgtcaacctgcccatttac
ctgaacgacaggatagtaggggttgtcgggattacaggggaacctgctcaggtgcgccct
tttggagaactcctgaaggtatcggtggagaccatgctgcaggaggctttcctcgccgag
caattcagagcgcaccagaatgccagggatctttatatgtacgaccttattatgggaaat
ttcgatgacgaggagttattcaagataagaggagccgctctcgggttcgatatgaacctc
cccagggtcgccgtcgcgattaaggtggaggatctgaatgcgagtaacagttatgctggg
gaactgattttgcagaaaaagagggagtacctcttaaattgcataaagacggcttttgac
aacccccagaatattataggctacagcggtagcagcagttttacggtgttctgcgtcgta
ggtgagactgatacccggaaaattaaaagacaggtgctggggtatgttggaaggcttgaa
tctctgctaaaaaaggatcggttccggttcagagccgggatcgggaaatttcatcagggg
ttgagaggactgaaaaagtcctattccgaagcaattcgggcgctgttgataggtgaaaag
gcgggtaatcctttaagcgtcctttttgtagccgacgtcagcctggaaattttgattgac
agcatacctgaagaagtattagaaaattttctcgacaaccttttacccggcggtcaggtt
ctggaggttataaaaaagcctaagttccttcaggtgctcagggctttctttgagagcgat
ttgaatatcagcacggcggccaggagattgaaaatatcgcgaaacaccgtagtaaatcgc
ctggagaagataaaagaaataacgggccttaatgcccggaaactctgcgatgcacttaag
ctgaaattgctgcttttgatatgcgagttggataaataa
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