Thermodesulfobacterium geofontis: TOPB45_0280
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Entry
TOPB45_0280 CDS
T01547
Name
(GenBank) Alpha-amylase
KO
K07405
alpha-amylase [EC:
3.2.1.1
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top00500
Starch and sucrose metabolism
top01100
Metabolic pathways
top01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
top00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TOPB45_0280
Enzymes [BR:
top01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
TOPB45_0280
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_57
DUF5904
SNAPC1
ArnB_C
Motif
Other DBs
NCBI-ProteinID:
AEH22394
UniProt:
F8C384
LinkDB
All DBs
Position
complement(277514..278713)
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AA seq
399 aa
AA seq
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MLYVIFYFQVHQPFRINKYKVFDIKEKVDYFDEDLNKYIFNKVSERCYLPANKLFKNLIE
SSDGRFKISFSITGTFVEQAKRYRPDVFESFLDLVKTGGVELLNETYYHSLSSVFDLNEF
LEQVAEHEELIKKEFGFIPTVFRNTELIYFDKLSDILLSLPHIKTILIEGADKILKGDSP
LYPRISYNHAHLLLLKHYRLSDDIAFRFSDKSWEEYPLTAEKYVSWIKDLTLIEKGGKNL
YLNLFMDYETFGEHQWKESGIFEFIKSVVELLLKERGIAFLLPSEVSHTLNYKPKTISVP
EPTSWADIERDLSAWLSNSLQWNAMKTCYELLKIAKEKRKKDLISILKKLTTSDHFYYMC
IKYFQDGDVHKYFSPYSSPEEVYRYYMSILSDIENRLEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgctttatgtaattttttattttcaagttcatcaaccttttagaataaataaatacaaa
gtttttgatataaaagaaaaagttgattattttgatgaagatttaaacaaatatatattt
aataaggtttctgaaagatgttatcttcctgctaataaactttttaaaaacctaattgaa
agctcagatggacggtttaagatctcctttagtattacaggaacttttgtagaacaggct
aaaagatatcgtcccgatgtttttgaatcctttttagatcttgttaaaactggaggagtt
gaattattaaatgaaacctattatcattctctttcctctgtttttgatttaaatgaattt
ttggagcaagtagctgaacatgaagagcttataaaaaaagaatttggttttattcctaca
gtttttagaaataccgagctaatttattttgataaactttccgatattcttttaagtctt
cctcacattaaaactattttgattgagggagctgataaaatattaaaaggagattctcct
ttatatccaagaatttcttataatcatgctcatcttcttcttttaaaacattataggctt
tcagatgatattgcctttagatttagtgataaatcttgggaagaataccctctaacagct
gaaaaatatgtctcttggataaaagatttaactcttattgaaaaaggaggtaaaaatcta
tatctaaatctatttatggattatgaaacctttggagaacatcagtggaaagaaagtggg
atttttgaatttataaaaagcgtggtagaattgttgttaaaagaaaggggtatagctttt
cttttaccatcagaagtgagtcatactttaaattataaacctaaaactatatctgtccct
gaaccaacctcttgggcagatatagaaagggatttatctgcttggttatctaattcttta
caatggaatgctatgaaaacctgttatgaattgttaaaaatagctaaagaaaaaaggaaa
aaagatttaatatctattcttaaaaaacttactacatctgatcatttctattatatgtgt
attaaatattttcaggatggggatgtgcataaatatttttctccctattcttcccctgaa
gaagtttataggtattatatgagtatattaagtgatatagaaaatagattagaggagtaa
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