Thermodesulfobacterium geofontis: TOPB45_1022
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Entry
TOPB45_1022 CDS
T01547
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top00470
D-Amino acid metabolism
top00550
Peptidoglycan biosynthesis
top01100
Metabolic pathways
top01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
top00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TOPB45_1022
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TOPB45_1022
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TOPB45_1022
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
top01011
]
TOPB45_1022
Enzymes [BR:
top01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
TOPB45_1022
Peptidoglycan biosynthesis and degradation proteins [BR:
top01011
]
Precursor biosynthesis
Amino acid ligase
TOPB45_1022
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
GARS_A
ATP-grasp_4
ATP-grasp_3
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
AEH23116
UniProt:
F8C5X5
LinkDB
All DBs
Position
1006513..1007451
Genome browser
AA seq
312 aa
AA seq
DB search
MSSIGVLKIALLAGGTSSEREVSLKGAEVVKKALEKLGHKYEFFDPAQDLPKLAQRAKEF
DCAFLVVHGPGGEDGTLQGFLDSIGLPYQGAGVLGSALAMHKGISKSLYKLAGLNVPEGK
TFSKDSSFEIIKTYGEKIGFPLVVKPATQGSSIGLSVVKDKKDLKKAVEAAFNVDREIIL
EKYLKGKEITVGILDDKPLPVVEIVPKVSEIFDYETKYTPGLSEEICPARLSERLTKKAQ
EYGLIAHKTLKLRHYSRTDMIIVEDEIYVLETNTIPGMTETSLLPLAAKVAGYSFPALIQ
KLLELTLRDKNT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctataggtgtattaaagattgctcttcttgctggtggaacctcatctgaaagg
gaagtatctttaaagggagcagaagtagtaaaaaaagctttagaaaagttagggcataaa
tatgaattttttgatccagctcaagatcttcctaaacttgctcaaagagcaaaagagttt
gattgtgcttttttagtagttcatggaccaggaggagaagatggtactttgcaaggtttt
ttagattctataggacttccttatcaaggagcaggggttttaggaagtgctcttgctatg
cataaaggaatatctaaaagtctatataaacttgctggacttaatgttcctgaaggaaaa
actttttcaaaagattcttcctttgaaataataaaaacttatggagaaaaaattggtttc
cccttggttgttaaacctgctacacagggttcaagtattgggttaagtgttgtcaaagat
aaaaaagatcttaaaaaggctgttgaagcagcttttaatgtggatagggaaataatttta
gaaaaatatcttaaagggaaagaaataacagtaggtattttagatgataaacctttacca
gtagtagaaatagtcccaaaggtttcggagatttttgattacgaaactaaatatactcca
ggtctttcagaagaaatttgccctgcaagactttcagaaagactgactaaaaaagctcaa
gaatatggacttatagctcataaaacattaaagctaaggcattacagtagaactgatatg
attatagtagaagatgaaatttatgtacttgaaactaataccattcctggtatgacagaa
acaagtcttttacctcttgcagcaaaagttgcaggttatagttttcctgcgctaattcag
aaattattagaattaactttaagagataaaaatacctaa
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