Thermodesulfobacterium geofontis: TOPB45_1388
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Entry
TOPB45_1388 CDS
T01547
Name
(GenBank) UPF0042 nucleotide-binding protein yhbJ
KO
K06958
RNase adapter protein RapZ
Organism
top
Thermodesulfobacterium geofontis
Brite
KEGG Orthology (KO) [BR:
top00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
top03019
]
TOPB45_1388
Messenger RNA biogenesis [BR:
top03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TOPB45_1388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_2
AAA_23
AAA_18
SKI
AAA_14
AAA_22
AAA_29
CoaE
AAA_16
DcpS_C
ABC_tran
AAA_24
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEH23469
UniProt:
F8C2R5
LinkDB
All DBs
Position
complement(1387130..1388008)
Genome browser
AA seq
292 aa
AA seq
DB search
MNIVIITGLSGSGKSTSLKAFEDIGYLSIDNFPIRLLLQFLEEVKESLEDKNIALVMDIR
DKYFLKEYPEVFKSLKEKGYNFEILFLDARNDVIITRFNQTRRIHPLMKGKIKSLEEAIE
KERELLGDLKEIANSIIDTSNFNVHQLRNEIFRLYKEREAHKNLILHFIGFGYKYGIPYE
ASFLFDVRFLPNPYFIPSLKPLSGKDKEVIDYLLNFSETLKFIEYLESFLEWLIPFYCKE
NRKYLTIGIGCTGGRHRSPAIIEILSQRLEEKYSDIEIVKTYRDIEKDVSHL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagttataattacaggtctttctggatctggtaaaagtacatctttaaaagct
tttgaagacattggatatctttctattgataatttccctataagacttcttttacagttt
ttggaagaagttaaagaaagtttagaagataaaaatattgctttggtaatggacataaga
gataaatattttttgaaagaatatccggaagttttcaaaagcttaaaagaaaagggatat
aattttgagatcctgtttttagatgcaagaaatgatgtaattattactagatttaaccaa
acaagaaggattcatcctttaatgaaaggaaaaataaaaagtttggaagaggctattgaa
aaagaaagggagcttttaggtgatctaaaagaaatagcaaactctattatagatacttca
aattttaatgttcatcaattaagaaatgaaatctttagactttataaggaaagggaggct
cacaaaaatttaattctccattttataggatttggttataaatatgggattccttatgaa
gcaagttttttatttgacgtaagatttttacccaatccttattttattccctccttaaaa
cccttaagtggtaaagataaagaagttatagattatttattaaatttttctgaaacttta
aaatttatagaatatttagagtcttttttagaatggttaattcctttttattgtaaagaa
aataggaagtatttaactataggtattggttgtacaggtggaaggcatagatccccagct
attatagagatcttatctcaaagattagaggagaaatattcagatatagaaatagttaaa
acctatagagatatagaaaaagatgtgtctcatttatga
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