Tomitella fengzijianii: FO059_02900
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Entry
FO059_02900 CDS
T06118
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
toy
Tomitella fengzijianii
Pathway
toy00550
Peptidoglycan biosynthesis
toy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
toy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FO059_02900 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
toy01002
]
FO059_02900 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toy01011
]
FO059_02900 (dacB)
Enzymes [BR:
toy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FO059_02900 (dacB)
Peptidases and inhibitors [BR:
toy01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
FO059_02900 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
toy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FO059_02900 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
DUF6215
Motif
Other DBs
NCBI-ProteinID:
QDQ96483
UniProt:
A0A516X0A0
LinkDB
All DBs
Position
636190..637602
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AA seq
470 aa
AA seq
DB search
MLKRVFGGRGKGAAGNLHRRRRRLQAVAAVAAVVVLAGVGVVVWRVSEGGSAAAAPPAPA
LITPSPQIVPVPPDAPTPTPPGLDAALAGALADPALGDLTGQISDAATGQVLWSKDAERP
RTPASVTKLLTSAAALIAVPRDQRITTSVVQGADGRIVLVGGGDPTLTAQPAGSSGYYRG
AAHIDELAAQIRATGVDVTGVDVDVDLYPGPTLAQGWFDSDIAGGNIIPMRPIALDGGRL
DIREPDSPRSDTPALDAGRALAVALGLGTEDVHLAAAPPQTQTQTLASVQSAPMVELIRQ
LLVHSDNVLADAVGRQVALATGRPADFDGTAAAVESVLRGAGFDLTGVELHDSSGMSVDN
KIPARLLDQLLSAAAGPAHPALRPLLDSLPVAAGTGTLADRYETNAQAGAGWVRAKTGTL
SGVSTLAGVVTDVDGRVLAFALMSGGTAPADARPALDAITAQLRGCGCQG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgtgttttcggcggccgcggcaagggggcggccggcaatctgcacaggagg
cgccgacgactgcaggcggttgccgccgtggccgcggtggtggtgctggcgggggtcggc
gtcgtggtctggcgggtgtccgaaggcgggtccgcggcggcggcaccaccggcccccgca
ctgatcaccccgtcgccgcagatcgtgccggtcccgccggacgcgccgacgcccacgccg
ccgggcctggacgctgcgctggccggggcgttggcggaccccgcgctcggtgatctcacc
ggtcagatcagcgatgcggcgaccggccaggtgctgtggtcgaaggacgcggaacgcccg
cggacgccggcgtcggtgacgaagctgctcacttcggccgcggccctgatcgcggtgccg
cgggatcagcggatcacgaccagcgtcgtgcagggggcggacggacggatcgtgctggtc
ggcggcggggatccgacgctcacggcccagcccgcgggatcgagcggttactaccgcggg
gccgcgcacatcgacgagctcgccgcgcagatccgcgcgaccggggtggacgtcaccgga
gtggacgtggacgtggacctgtacccggggcccacgctggcccagggctggttcgactcc
gacatcgcgggcggcaacatcatcccgatgcggccgatcgcgctggacggcgggcggctg
gacatccgcgaacccgactcgccgcgctcggacaccccggcgctggacgccggccgggcg
ctggccgtcgcgctgggcctgggcacggaagacgtgcacctggccgccgctccgccgcag
acgcagacgcagacgctcgcgagcgtacagtcggcgccgatggtcgagctgatccgccag
ctgctggtccactccgacaacgtgctggccgacgctgtggggcgccaggtggcgttggcc
accggacgccccgcggacttcgacggcaccgccgccgcggtcgagtcggtgctgcgcggg
gccggattcgatctgaccggcgtggagctgcacgactcgtccggcatgtcggtggacaac
aagatccccgcccggctgctcgaccaactgctctcggccgccgccgggcccgcgcacccc
gcgctgcggcccctcctggactcgttgcccgtcgccgccgggaccggcacgctggccgac
cgctatgagaccaacgcgcaggccggcgcgggctgggtgcgggcgaagacgggcacactg
tcgggtgtgagcacgctcgcaggcgtggtcaccgacgtagacggccgcgtgctggcgttc
gcgctgatgtccggcggcaccgcgcccgcggacgcgcgtcccgcgctcgacgcgatcacg
gcacagctgagggggtgcggatgccagggctga
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