Treponema pallidum subsp. pallidum Nichols: TP_0681
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Entry
TP_0681 CDS
T00016
Name
(GenBank) alanine racemase (alr)
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa00470
D-Amino acid metabolism
tpa01100
Metabolic pathways
tpa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TP_0681
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TP_0681
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpa01011
]
TP_0681
Enzymes [BR:
tpa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
TP_0681
Peptidoglycan biosynthesis and degradation proteins [BR:
tpa01011
]
Precursor biosynthesis
Racemase
TP_0681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Usp38-like_N
Motif
Other DBs
NCBI-ProteinID:
AAC65644
UniProt:
Q56346
LinkDB
All DBs
Position
complement(745018..746091)
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AA seq
357 aa
AA seq
DB search
MSRTRARVCLPVKADAYGHGACDVAQAALSCGVHSFAVACVQEASQLRAAGVRAPILCLS
TPTAEEISSLIEHRVHTVISERAHIALIARALRQSADTGATCGVHVKIDTGMGRIGCAPD
EACALVQMVCATPGLHLEGVCTHFSVADSVRAEDLQYTEMQRAHFMHCVQYIRKSGISIP
LVHAANSAALLCHPRAHFDMVRPGLLAYGYAPESVHPAVRSVFLPVMELVTQVRAIKKIP
AGAYVSYQRLWRAHTETHVGILPIGYADGVMRALSPGLQVCIGGKWYPVVGAICMDQCVV
DLGTPLRVTVGDRVTLFGPQDAGGPGQGADVLASHAGTIPYELLCAIGKRVERVYIR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtacacgcgcgcgtgtgtgtctacctgttaaggcggacgcgtatggacacggt
gcgtgtgacgtcgcacaggcggcgctttcgtgcggggtgcactcgttcgccgttgcatgt
gtgcaagaagcgtcgcaactgcgtgcggcaggtgttcgcgcgccgattttgtgtttaagt
actccaactgctgaagagatttctagtcttattgagcatcgtgtgcacaccgtgatttct
gagcgcgcgcatattgcccttatcgcacgcgcgctccgtcagtctgctgatacgggtgcc
acgtgtggggtacacgtaaagattgataccggaatggggagaatcggctgtgcgccggat
gaggcctgtgcgctcgtgcagatggtgtgcgcaacaccgggtctccatcttgagggggta
tgtacgcatttttctgtcgcggattctgtgcgtgctgaggacctgcagtacactgagatg
caacgtgcacattttatgcattgcgtacagtacatacggaaaagtggcatatcgattcca
ttggtgcatgcggcaaactctgcagcgctgttgtgccatccgcgggcacacttcgacatg
gtgcgtccgggattgttggcatacggctatgcccctgagtctgtgcatcctgctgtgcgc
agtgtgttccttcccgtcatggagcttgttacccaagtccgtgcaatcaaaaaaatacct
gcaggcgcgtacgtttcttaccagcgcttgtggcgtgcgcatacagaaacacatgtaggt
attctgcctatcggatatgcagacggagttatgcgcgcgctgtcgccgggtttgcaggtg
tgcattggggggaagtggtatccggtggtgggggcaatttgcatggaccagtgtgtagtg
gacctaggtaccccgctgcgtgtgacagttggagatagggtgacacttttcggtcctcag
gacgcaggtggcccaggacagggggcagatgtgctcgcctcgcatgcaggcaccattccc
tatgagcttttgtgcgcgattggtaagcgtgtcgaacgggtgtacatccggtga
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