Tympanuchus pallidicinctus (lesser prairie-chicken): 128071799
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Entry
128071799 CDS
T08967
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128071799 (AFF3)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128071799 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
MACPF
Motif
Other DBs
NCBI-GeneID:
128071799
NCBI-ProteinID:
XP_052520836
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGTFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTPLPKPDELLIADSRPPP
PPSISNTSSAPAALPAQQSKSTTMGWQKAGHNAASEGQQRASKHGHRSLESHKGDFKLAN
QKSSLEKLKRYASSPTSSSSNAAQQSSLRATLGDSVSRVQQPAKLNCGSEGGAQVQERPS
KHSSGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLLTETTKLYRGVP
SNKPDSARTKSKITKFNIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGKAEQS
KFPFPNKESQQGSTGHSNTRKSDVEPKSPEKGTTHTSMLEDDLKLSSDEEENDQQAAQRS
ALRVLSDSSLVGPQSSTRAPGLSSKGSSSSSSSESESSSESDSESESSSSESDGSKPSHY
SSPEPEPPSSNKWQLDKWLNKVTPHKAPILTPHDGSALEAHPYYGHVKAERQEDEKTPAP
DPTEHRGGESRTAAASTAATVGDGPRPRTANKAPGSKGGRQKSPPAADGGPPRRAAGKKA
PRRAERTAAGDGAHCRGAEEPAGSHGFLESAGSEAPRARPGASVGGAGCRAGHRREPRSA
AVGEKRRARGPSKTAPKSKEFIETESSSSSSSSESGSDSEREERPLPKAQAAAGAEPHAK
DLGTGAASKAHGGCSAFGSINARTNSEIAKELEEQFYTLVPFGRNELLSPLKDSDEVKSL
WVNIDLALLSRIPERLPEEPLAMSAGTNQAASIPQGSSAELPAEKGLPKSRRKRKCENEE
EYRDIKKTHLERENSSRLAASAHSIATANHCNVNENSLALPINKNEKVLRSPVSPLSDAS
KHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPNLGDFNKAVHTNSENVLLCNKP
QTQTEPWSPLSSAPRDCRRTKLIFDDMPRNADYFMQEAKRKKHKADAMVEKFGKALNYAE
AALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAALCYR
CLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSSWGNSGKSTGTPSPMSPSPSP
VSSVGSQGSTGPPSSSPIISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENREFF
NDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSTHLS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctgctccaggagtgggacctggactcgctgtgtgtctac
gagccggatagaaacgtgctgcgcaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcacatttaacaccagttactccctcttcagtgaaccgtataagactaac
aagggggacgagctctctaatcgcatccagaatacactgggcaactatgatgaaatgaaa
gatctgctaactgaccgatcaaaccagagccaccttgttggggttccaaaacctggggtt
cctcagacacctctccccaaacccgatgaacttcttatcgccgactcaagaccgccacct
cctccttccatttccaacacttcttccgcaccagcagccctacctgcgcagcagagcaaa
agtaccacaatgggttggcagaaggctgggcacaatgctgcttcagaaggtcagcagaga
gccagcaagcatggacaccgctcactggagtcccataagggtgacttcaaactggcaaac
caaaaatcaagtctggagaaactgaaacgctatgcatctagtcccacctcctcctcctcc
aatgctgcccagcaaagctcactgagagccacactaggtgacagtgtcagcagagtgcag
cagccagcaaagttaaattgtggctcagaaggaggagctcaagtgcaagagagaccctca
aagcacagcagtgggcactgtgtccagaacttcccaccatctcttgcttcgaagcccagc
ctggttcagcagaaaccaacggcttatgtaaggccaatggacggtcaagaccaggcccct
gatgagtctccaaagctgaagttattgactgagacgaccaagttgtacaggggagtgcct
tctaacaaacctgattcggccaggaccaagtcaaagataacgaagttcaacattcctaag
caagaagaggacagtggaacaggagataacagctgcattgaagaaatattgcgggagatg
actcattcatggcctccaccactgtcagctattcacacaccagggaaggcagagcaaagc
aagtttccctttccaaacaaggagtcacaacagggatctacaggacacagcaatacaaga
aaaagtgatgtagagccaaagagtccagagaaaggcacaactcatacatcaatgctagaa
gatgatctgaagttaagcagcgatgaagaggagaatgaccagcaggcagcacagagatct
gctctccgcgttctgtctgacagcagcctggtggggccgcagtccagcacccgagcccca
ggactctctagcaagggatccagcagcagcagctccagtgagtccgagagcagctcggag
tctgactcagagagcgagagcagctccagcgagagtgacggcagcaagccctcgcattac
tccagcccagagcctgagccaccctcatctaacaagtggcagctggacaagtggctgaat
aaagtcaccccacacaaagcacccatcctgaccccccatgacggttcggcccttgaagcc
cacccctactacggccacgtgaaggcggagcggcaggaggacgagaagaccccggcccca
gacccaactgagcaccgcggaggggagagccgcaccgccgccgcctccaccgccgccacc
gtcggggacgggccgcggcccaggaccgccaacaaagcaccgggcagcaagggaggacgc
cagaagtcaccccccgccgctgacggcgggccgcccaggagggcagcggggaagaaggca
ccgcggcgggccgagaggaccgccgccggagacggcgcccactgccgtggggcagaggag
cccgcagggagccacggctttctggaaagcgccggcagcgaggcgcccagggcccggccc
ggtgcgagcgtcggcggtgcgggctgcagagcggggcatcgccgggagccccgctcggcc
gcggtcggtgagaagcggcgggcccgggggccgagcaaaacggcgcccaaatccaaggag
ttcatagagaccgagtcctcgtcctcgtcgtcctcctccgagtcgggctccgattcggag
cgggaggagcgcccgctgcccaaggcgcaggcggcggccggggccgagccgcatgccaag
gacttggggacgggagccgccagcaaagcccacggcggctgcagtgcctttggctccatt
aatgccaggactaatagtgaaatagcaaaggagctggaggaacagttttacaccctggtt
cctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggtaaagtcgctg
tgggtcaacattgacttggctcttttgtccaggattccagagcgtttgcctgaagagccg
ctggcaatgagcgccggaacaaaccaggcagccagcatcccgcagggtagtagtgctgag
ctccctgcagagaagggcttaccgaaatctagaaggaaacgcaagtgtgagaatgaggaa
gagtacagagacatcaagaagactcatttagagcgagagaattcttcacgattagctgcc
tctgcccacagcatcgcaacagcaaatcactgcaatgtaaatgaaaatagtttggcacta
ccaataaataaaaatgagaaagtgcttcggtcacccgtctctcccctctctgatgcatca
aaacacaaatactccaacgatgatttaacttcctccagcagacctaatggcagcagtcta
ttaccttccatctcctccagcaaaaagcataagggtgaaatccagtcacagccaaatctc
ggagacttcaataaagcagttcacaccaattcagaaaatgttcttctctgcaataagcca
cagacccaaacagagccttggtcacctctgtccagtgcacccagggactgcagaaggaca
aaacttatctttgatgatatgccacgcaatgcagattactttatgcaggaagctaaacgg
aagaaacataaagcagatgcgatggtggaaaagtttggaaaggcactgaattatgcagaa
gcagcactatcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaatctaaa
tccccctatacaatgtattcagaaacagttgaactcatcaggtacgcagtgagactaaaa
acccactcaggccccaatgccacgccagaagacaagcagttggcagcactatgttaccgc
tgcctggcccttctgtactggaggatgttccgactcaagagagaccatgctgtcaagtat
tctaaagcgcttattgagtatttcaagaattcatcaaaagccgcccagaacccatcttct
tggggtaacagtggaaagagcacaggaactccatcgcccatgtcccctagcccttctcca
gtcagttctgtcggatcccaggggagcacagggcccccttcctcatctcctataatcagc
atcccccagcgcatccatcagatggccgccaaccacgtcagcatcaccaacagcatcctg
cacagctatgactactgggagatggctgacaacctggccaaggaaaatagagaatttttt
aacgacttggatgcattgatgggacctatcaccttgcacagcagtatggagcatttagtt
cagtacacccaacaaggacttcactgggtgcggaatagcactcacttgtcataa
DBGET
integrated database retrieval system
