Tympanuchus pallidicinctus (lesser prairie-chicken): 128072150
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Entry
128072150 CDS
T08967
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510
Focal adhesion
tpai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128072150 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128072150 (LAMC1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
128072150
NCBI-ProteinID:
XP_052521622
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MGGVGGRRALPRALALLTVLALPRGGGAAMDECLEERSGRPQRCMPEFVNAAFNATVVAT
NTCGTPAEEYCVQTGVTGVTQSCHLCDASQPHLRHGASFLTDYNSQADSTWWQSQSMLAG
VQHPAAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTY
NKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTA
TDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIRNELGKLVCN
CKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGH
CSGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVVGEK
CDRCQPGFHSLSEAGCRPCSCNPAGSTGECNMETGRCTCKDNVEGFHCERCKPGFFHLDP
SNPRGCTPCFCFGHSSVCTNAVGYSVYSITSSFQFGEDEWHAEQRDGSQVPLQWSSETQD
ISVISDSYFPIYFVAPRKFLGNQVWSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSV
PLIAQGNSYPSESPLTYTFRLHEAADYPWRPALSAFDFQKLLHNLTAIKIRGTYSERSAG
HLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCSC
NGHSETCDPETGVCDCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPAGSSCAVVPR
TKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQT
GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACHCNPYGTVNQQTSCNQVTGQCE
CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTGQHCD
RCEANHFGFSPEGCKPCDCDPEGSRALQCREDGRCECKEGFVGNRCDQCEENYFYNRSWP
GCQECPACYRLVKDKVAEQRERLRELENLIANLGTGEETVTDQAFEERLKQAERDVMELL
REAQNSKDVDQGLMDRLRDINSTLTSQLSRLRNIQNTVQETENLAEQARGRVEDTEDLIA
MASDMLEKAKMAAGNVSITAPESSGDPNNMTLLAEEARRLAERHKQEADEIVRIAKAAND
TSTEAYQLLLKTLAGENQTARDIDELNQKYNQARNISRDLERQASSVLEEAEEAGNKALQ
IYANLTNLPTVDTTGLESEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLE
KGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEE
ALKKIPAITQTIAEANNKTRQAELALGNAAADAREAKTRADDAEKIASTVQKSAAATRAE
ADKTFSDVTGLAKEVDDMMKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAEDNARKA
KNSVNSLLAVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVAFLEREAR
KQDDAIQSYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgttggcgggcggcgggcgctgccgcgggcgctggcgctgctgaccgtgctg
gcgctgccccgcggcggcggcgctgcgatggacgagtgcttggaggagcggagcgggcgg
ccgcagcgttgcatgcccgagttcgtcaacgccgctttcaacgccacggtggtggccacc
aacacgtgcggcacgccggccgaggagtactgcgtgcagaccggcgtcaccggcgtcacc
cagtcgtgccacctgtgcgacgcctctcagccccacctgcggcacggcgcctccttcctc
accgactacaacagtcaggccgacagcacctggtggcagagccagagcatgctggccggc
gtacagcaccccgccgccgtcaacctcaccctgcacctcggaaaggcctttgacatcaca
tacgtgagactgaagttccacaccagcaggccagagagcttcgccatctacaaacgcaca
cgggaggatggcccgtgggtgccctaccagtattacagtgggtcctgtgagagcacctat
aacaaagtcaaccggggctttattcggactggggaggacgagcagcaggcactctgcacg
gatgagttcagtgacatctcccccctcactgggggcaacgtggctttctcaacgttggaa
ggacgtcccagcgcctacaactttgacaacagccctgtgctgcaggaatgggtgacggcc
accgatattcgggtgagcctcaatcgcctcaacaccttcggagatgaagttttcaatgac
cccaaagtgctcaagtcgtattactacgcgatttctgattttgccgtgggtggtagatgt
aaatgcaatggccacgcgagtgagtgcataaggaatgagcttgggaagctggtctgcaac
tgcaagcacaacacctttggggatgactgtgagaagtgccttcccttcttcaatgaccgg
ccgtggagaagagcaacagcagaaagtgccaacgagtgcttgccttgtgactgcaatggg
agatcccaggagtgctacttcgaccccgagctgtaccgctccaccggccatggcgggcac
tgctcgggctgccgggacaacaccgacggcgcccactgtgagaggtgcagagacagcttc
taccgcctcgggagcgaggagggctgcctgccctgcagctgcaaccctgtgggctccctc
agcacgcagtgtgatagctatggccagtgcagctgcaaacctggtgtcgtgggagagaaa
tgtgaccgctgccagccgggcttccactccctctctgaggctgggtgcaggccctgttct
tgcaatcctgctggcagcacaggtgaatgcaacatggaaacaggacggtgtacttgcaag
gacaacgttgagggcttccactgtgagagatgcaaacctgggtttttccatctggatccc
tcaaatccaagaggctgtacgccctgcttctgttttggacactcctcagtttgcaccaat
gctgttggctacagtgtgtacagcatcacctccagctttcagtttggagaggacgagtgg
catgctgagcaacgtgatggctcccaagtcccactgcagtggagttcagagacccaggac
atctctgtcatctcggacagttacttccccatttattttgttgcaccacgcaagtttttg
ggcaaccaagtttggagctacggtcagaatctgaccttctccttccgcgtggacagacgg
gacacacgtctctctgcagaggacctggtgctggaaggggctgggctgcgtgtgtcggtg
cctctcattgcccagggcaactcgtaccccagtgagagcccactgacctacaccttcagg
ctccatgaggctgccgattacccgtggaggcctgctctctctgcattcgacttccagaag
cttcttcacaatttgactgccatcaagatccgtggaacatacagcgagagaagtgccggt
cacctggatgacgttaccatcaccagcgctgtcccaggggccggcgtgcccgcggcatgg
gtggagagctgctcctgccctgcaggctatgaggggcagttctgtgagcgctgctccccc
gggtaccgccgagagacccctggcctgggaccctacagcccctgcgtgccttgcagctgc
aatgggcacagcgagacctgtgatcctgagacgggcgtttgtgactgcagggataacact
gcgggctctcactgtgagaagtgcagcgatgggtactacggagatgcgacagcaggcaca
gccttggactgccagccctgcccgtgccctgctggctccagctgcgccgttgtgccccgc
acaaaggaggttgtgtgcaccagctgccagacgggcaccacaggcaagaggtgtgagctg
tgtgatgatgcctactttggagatccgctgggtgaaaatggggctgtgaggccgtgccgc
ctgtgccagtgcaatgacaacatcgatcccaacgctgtgggcaactgcaaccgacagaca
ggagagtgcctcaagtgcatctacaacacggccggcttctattgcgaccgctgcaaggat
ggcttctttgggaaccctctggcccccaaccctgctgacaaatgccgggcttgtcactgt
aatccctatggcaccgtgaatcagcagacgagctgcaatcaagtgacagggcaatgtgag
tgcctttcccatgtcactgagagggactgcagtgcctgtgagcctggcttcttcaacctg
cagagcggccgaggctgtgagaggtgtgactgccatgctctgggctccaccaacggccag
tgtgacatatggacggggcagtgtgagtgccagcccggcgtcaccggccagcactgcgac
cgctgcgaggccaaccactttgggttcagccctgagggctgcaaaccatgtgactgtgac
ccggagggctcacgtgccctgcagtgccgtgaggatggtcgctgtgagtgcaaggagggc
tttgtggggaaccgctgcgaccagtgtgaggagaactacttctacaacaggtcatggccg
ggctgccaggagtgccctgcatgttacagattagtgaaagataaggtagcagagcaacga
gagaggttacgagagctggaaaatcttatagcaaacctgggcacgggagaagaaactgtc
actgatcaagccttcgaggagaggttgaagcaggcagaaagagatgttatggagctgctc
cgagaagcacagaacagcaaagacgtagatcagggtctcatggatcgtctcagagacatc
aacagcacactgacaagtcagctcagcaggctgaggaacatccagaacacggtgcaggag
acagagaacctggcagagcaagcccggggccgggtggaggacacagaggacctgattgca
atggcttctgatatgttggagaaggcaaagatggcagctggcaacgtgtccattacagcc
ccggagtcgagtggtgaccccaacaacatgactctgttggcagaagaggctcgccggctg
gctgagaggcacaaacaagaagctgatgagattgttcgcattgccaaggcagccaacgat
acttccacagaagcgtatcagctgctgctgaagaccctggctggggaaaaccaaacagca
cgtgatattgatgagctcaaccagaagtataaccaagcaagaaacatttctcgagatcta
gagagacaggccagcagtgtgcttgaggaggcagaggaagctggaaataaggccctccag
atctatgctaatctcactaatctgcctactgtggacaccacagggctggagagtgaagca
aataagatcaagaaggaagcggaggaattagatcagttaatagcaaggaagttgaaggac
tatgaagacctgagggaagatatgaaaggaaaggagctggaagtcaagaacctcttggag
aaagggaagacggagcagcagactgcagaccagctcctggctcgagcagatgcagcaaaa
gccttggctgaggaagctgctcggaagggcaatggcacattgcaggaggccaacaccatt
ctcagcaacctgaaagatttcgataagcgggtgaacgacaacaagacagcagctgaggag
gctctgaagaagattcctgccattacccagaccattgctgaagccaacaacaagacccgc
caggcagagctggctctcggcaatgctgctgctgatgcccgtgaagccaaaactagagca
gatgatgctgagaaaattgccagcactgttcagaagagtgctgctgccaccagagcagaa
gcggacaagaccttctctgacgtgacggggctggccaaggaggtggatgacatgatgaag
caactccaggaggcagaaaaagagctgaaacgtaaacaagatgatgctgatcaggatatg
atgatggcaggcatggcctcacaggcagcccaggaggcagaagacaacgcaagaaaagcg
aaaaactctgtgaacagcttgcttgctgtcattaatgaccttttagaccaactagggcaa
ctggagacggtggacttgaacaaactgaatgagattgagggtaccctgaacagtgccaaa
gaccagatgaaagatagcgacctggaccagaaggtggctttccttgagagagaagccagg
aagcaagatgatgcgatacagtcctacaacagggacattgaggaaatcctgaaagacatt
agcaacctggaggacatcaggaagaccttgccatctggctgttttaacaccccgtccatt
gagaaaccctaa
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integrated database retrieval system
