Tympanuchus pallidicinctus (lesser prairie-chicken): 128073115
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Entry
128073115 CDS
T08967
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128073115 (SEC16A)
Membrane trafficking [BR:
tpai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128073115 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
128073115
NCBI-ProteinID:
XP_052523474
LinkDB
All DBs
Position
Unknown
AA seq
2421 aa
AA seq
DB search
MQQPPQTVPAGAAAPPPAGIARNTYWRSTSLSKRANATAAPVQPVTDPFAFGRQTPQGFT
APLDNPSKGNALVMQSSSPAAFPQPAVVHSSPAHVGDNPHGLHPSLPASVSQPGANSSTF
SNVPIPAPSPGYVTNSTADLHPNADLGLHGSAVPSSGPPATALFPPAPQQPVSQWRPVQG
NLQSPVRNFVPYSEPHSQTDIHNVSQSPVSTSHPPPQTNLQRGPVHQGVPQNAVQAPLAV
GCEKNGKNGSANSGHHMNSFQPGNVFRQNTETTNAWLNQPYQEQFYPQPPLQDSSSVIPT
AQENNLQKQSPGMSEASNRPVPTDQDSGTLSMFFKGDEAENEEILSSEKNYMVEKPEFAC
QPHSSPLYHQPGHPQRAPANVLSQAQMGTGSANEMIQKGMDVQYFPKILSQQEAQAAKQS
MFVSDGKAGVGDAAGNGGSQYENVENLECIQNQEVLPSEPRNMNASSPSAHPDLYRYGSL
PGQVLPKNAVVSHAEGGPNLEAPDSLAHPVRPDSVSSNYSNISHRSASSSARPQEQIGTF
IQQESGKPDEESSACFFKQIDSSPLGDDSSEINPNKSYHGNLSQPPTPSPPKPTGVFQTS
ANSSFEPVRSHGVGIKPAEIDQAKMVVELRENHPNQKSTKKGTAMPAASPGNLEQPPDNL
ETIFMPQVYPLPLAVPGEAGNILHSGPVMENMQSLSERRSSTRAQGAIKKCDSPATTLWA
HNELPNFGGNVLLAPAAPAVYVPAKQTVEVIQPPEEGLSNQQPTKPGSIAVQPSQDGNIS
SENLENPPKLGEEEALQSQASSGYASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSI
SLSNQLSSNENSQPMKDSRVGDKPSVGPQTSHAGGIISGENALLPVMQVGSLLANAPPNS
NLLKHNLLQSPVNSSDIASNQPANLLVKTPSNLAPEGQKNVNFEGFAPEFASKSGAYSSI
SPGMNLPSGNTSALLPPVNSVVQTKNSVNRSNSKEEAAGVLDFTVSRTLEKSSASNSVQV
HNQLLSGGPVHPQQPAGSAGQAGPEVRDKQHFYQQVTKDVQHQAVPDRAVQGALPSQPQM
QAAQMPASSGQSSASSNYQTAAGPRGAQASQQCENQEPRNQEASSAQLPSPDKQPGSGQP
SAAVAPTAPATTGQPALPSAQQDLQRPPLPQTPQDAFGPPQNPYYYYRHPYDAYQPPYPP
PYPPPDPRTAAHLYYLEDSYGQYDPRYRYYDSSSTAYMEPGSYRYSEPERPSSRASHCSD
RPSSRQGYPEDYYAKTGWADYYPGYYPSTYDYGDPSRWERYSSAYDPRYRDPRSYDQRYL
YDGEHNPYQKREAYPYSNRHDRYEDRWRYDPRFTGSFDDETEPPRDPYGDEFDRRSVHSE
HSGHSLRSSHSVHSHRSSFSSRSQQSQLYRSNHDLTANVYETAAQAVPLHTDYPYGGYAP
NFDGQQPFTDYGYPTETGWSAVDQVPLRPLTPEKFSVPHLCARFGPGGFLIKVLPNLPSE
GQPALVEIHSMETMMQHSPEQEEMRAFPGPLAKDDTHKVDVINFAQNKATQCFKNENLID
KESASLLWDFIVLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQV
EEESGEAQLSFLTDSLITTIDSLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLAS
KMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSN
LTNNVDLESRTIATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPF
LKFATNEAIQRTEAYEYAQSLGTQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISR
TVLKNPQYYSPVLIGQLIQMSSQLRLFDPQIKEKPDQESFVEPSWLVRLRHVDGQIKEGA
IAYSTDRSTPQQYPCSTPSSELDHPSQYDGAGVGHDVGPGAENALLASLLPNMAQQMQSV
QLMPSAPQAILDGSAAGIPPGDQDAVQSVPFYPVASQPIGPGPGFAPPGFSNQYGAEPSP
LYLGSTLPPGGPPQETEPQEEEQMNLETGMQRIASESPSRNSFPEQREEDFYNRMARMAP
ERRSRSASQSSAYMGYGQRSRTTSESSAHSVGRERSNSAAKQPPPSPPDPVGKETKKEVK
KEPASRKTGANWFRWLMGKGKNEAHLPDDKNKSIVWDEKKQRWVNLDEPEEESKPPPPPP
TGFPKVPQAAPSGPGGPPSAPVNMFSRRAAGSRARYVDVLNPGGTKAGGAVPAPSDLFAP
LAPMPIPANVFVPNAVPGDPQPVEGSGAAEQTPAANQTNPDPSAAVDQEYLNPAVVPPGS
GLPVSNPDGFQPGELSRSSSMSSLSREVSQHFNQPAPAPPSGEPSAGAVQFYNPSQFAQS
PAVTGSSRPGRIGQRKYPTLK
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagactgttccagcaggagcagcagctccacctcctgcaggcatt
gctcggaacacgtactggagaagcacgtcgctcagtaaacgagcaaatgcaacagctgcc
ccggtgcagcctgtgacagacccttttgcctttggcagacagactccgcagggttttact
gcccctttagataatccatccaagggcaacgcactggttatgcaaagttcttccccagcg
gcgtttcctcagccagccgttgtgcattcttcgccagctcacgtaggggacaatcctcat
ggactgcatccgtcactgccagcttctgtatctcaaccaggagcaaacagcagtacgttt
tctaatgttccaattcctgctccatccccaggatacgttacaaacagcactgcagacctg
catccaaatgcggatctcggactccatgggtctgcagtaccttcttctggaccccctgca
acagcactcttccctccagctcctcagcagcccgtgtctcagtggagacctgttcaaggt
aacctgcaatctccagttcgaaattttgtgccctattctgaaccacattctcagactgac
attcataacgtttcccagtctcctgttagcacttctcatcctcctccgcagactaattta
cagcgtggtcctgtgcatcaaggagttccacagaatgctgtgcaagcgcctttagctgtt
ggttgtgaaaaaaatgggaaaaatggctctgcaaatagtggtcatcacatgaacagcttc
cagcctggaaatgtctttagacagaacacagaaacgacaaatgcttggttaaatcaacct
taccaggagcagttttacccacagccaccgttgcaagactccagctctgtcattcctaca
gctcaggaaaataacctccagaaacagtctccaggtatgtctgaagcatcaaatagacct
gttcccacagaccaagactcaggaaccctttccatgtttttcaaaggggatgaagcagaa
aatgaagaaatactttcatctgaaaaaaattacatggttgagaaacctgagtttgcttgt
caaccacattcatcacccttgtatcaccagccggggcatcctcagcgggctccagctaac
gttctctctcaggctcagatgggtacaggttcagccaacgagatgatacaaaaagggatg
gatgtccagtattttcctaaaattctaagtcagcaggaggcacaggctgctaagcaatcg
atgtttgttagtgatggcaaagcaggtgtgggtgatgcagctgggaatggtgggtcacag
tatgaaaacgtggagaacctggagtgcatacagaaccaagaagtgctgccaagtgagccg
cgtaacatgaatgcttcatccccttctgctcatcctgatctgtacagatatgggtcctta
ccgggtcaggtgcttccgaagaatgctgttgtgagccatgctgaaggaggaccaaatctg
gaggcacctgattcattagctcatcctgtacgaccagatagtgtgtcttcaaactatagc
aacatcagccataggagcgcttctagctcagcaaggcctcaagagcagattggtacattt
attcagcaagaaagcgggaagcccgatgaggaatcttctgcttgcttctttaagcagata
gactcttctcctctgggagatgattcaagtgagatcaacccaaacaagagctaccatggt
aacctgtcccagcctccaactccgagtcctcctaagcccacaggagtatttcagacgagt
gcaaatagttcttttgaacccgtgaggtcccatggagttggtataaaacctgcagagatt
gaccaagcaaaaatggtggttgaattaagggagaaccacccgaaccagaagagcaccaag
aagggtacagctatgcctgctgcatcacctggcaatcttgaacagccaccagataatcta
gaaactattttcatgcctcaggtataccctctgcctctagcagtccctggtgaagctgga
aatatattgcactctggacctgttatggaaaacatgcagtctttgtctgagagaaggtcc
tccacaagggctcagggagcaattaagaagtgtgatagcccagcaacaactctgtgggct
cacaatgagttacctaattttggaggaaatgttcttctagctcctgctgctcctgcagtt
tatgtacctgccaaacaaactgtagaagtaattcagccaccggaagaaggcctgtctaat
cagcagccaaccaaaccagggagtattgctgtgcagccttcccaagatggaaatatatca
tctgaaaatcttgagaatcctcccaaattgggagaagaagaggcgcttcagtctcaggca
agttctggttatgcaagtttgttgtcttctccacctacagagtctttgcaaaatcagcct
atcctaattgctcagcctaatcaaagttataacttggctcagccaattaatttttctatt
tctctatctaatcagctaagcagcaatgagaacagtcagccaatgaaggattccagggtt
ggggacaagccttcagttggtccccaaacatcacatgctggtggaatcatctctggggaa
aatgcactgttgcctgtgatgcaagttggatctctgttagctaatgctcctccaaatagt
aatctgttaaaacataatttattacaaagccctgttaattcctctgatatcgcttctaat
cagcctgcaaacttgctcgtgaaaacaccatctaatttagctcctgaagggcaaaagaat
gttaattttgaaggttttgctcctgaatttgctagcaagtcaggggcttattcatccatc
tctcctgggatgaatcttcccagtggaaacacaagtgcattgcttccacctgttaattct
gtagtacagaccaaaaattctgtaaatcgttcaaatagcaaagaagaagctgctggagtg
cttgattttacagtgtcacggacgttggagaaaagcagtgcaagtaattccgtgcaagtg
cataatcagctgctttctggtggtcctgtgcatcctcaacagccagctggcagtgctggt
caagctggtcccgaggtgcgtgacaaacaacatttctatcaacaggtgacaaaagatgta
cagcatcaggctgtgccagacagagctgtacagggagcattgccatcccaaccacaaatg
caggcagctcagatgccggcgtcttctgggcagtcctcagcttcttcaaactaccagact
gcagcagggccgagaggcgcgcaggcgtcccagcagtgtgagaaccaggagcccaggaac
caagaggcaagttcagcacagctgcccagccccgataagcagccgggctctggacagccc
tcagctgctgtggctcccacagctcctgccaccaccggtcagccagcgctgccaagtgca
cagcaagacctgcagcgtcctcccctgcctcagactcctcaggatgccttcggtccacct
cagaacccttattactactacaggcatccttacgatgcttaccagcctccgtatccacca
ccttaccctcctccagatcccaggacagcagctcatctgtattacctggaggatagctat
ggacagtatgacccacggtacaggtactacgacagcagcagcactgcttatatggagcct
ggcagttaccggtattctgagcctgaacgtcctagctccagagccagtcactgctctgat
aggccctcttctagacaaggatatcctgaagattattatgcaaaaactggatgggctgat
tattatccaggctattacccgagcacatatgattatggagatccgagtcgttgggaacgt
tactcatcagcctatgaccccaggtacagagatcctagaagttatgaccagaggtatttg
tatgatggtgaacacaacccttaccagaagagagaagcatacccatacagcaacagacat
gaccgatacgaggatcgttggagatacgatcctcgtttcactggaagctttgatgatgaa
actgagcctcccagagatccttatggtgacgagttcgacaggcgcagcgttcacagtgag
cattcaggtcacagcctgaggagctcccacagcgtgcacagtcaccggagcagcttcagc
tctcgttcccagcagagccagctgtatagaagtaaccacgatttaacggctaatgtgtat
gaaactgctgcacaggcagtgccactgcacacagattacccgtatggtggatacgctcct
aactttgatggacaacagccttttacagattatggctacccgactgaaactggatggtca
gctgtagatcaagtgcccttaaggcccttaacgcctgagaaattttcagtgcctcatctg
tgtgccaggtttggccctgggggcttcttaataaaagtgctgccaaacctgccttcagaa
ggacagccagccctggttgaaatacacagcatggagactatgatgcaacattctccagag
caagaagaaatgagagcttttccaggtcctcttgctaaagatgacacccataaagtggat
gttatcaattttgcacaaaacaaagctacacaatgttttaaaaacgaaaatttaattgac
aaagaatctgcaagcctgctttgggacttcattgtactgctgtgcaggcagaatgggact
gttgtgggaacagacctggctgaacttctgctccgagaccataaaacagtatggcttcct
gggaagtcccctaatgaagcaaatttaattgatttcactaatgaggctttggaacaagta
gaggaggaatctggtgaagcccagctctcatttctcactgatagtcttataaccacaatt
gacagtcttgagaaagaaacagagaggttcagagagctgctgctttatggacgtaagaag
gatgctttggagtcagccatgaagcatggcttatggggtcatgctctgctacttgccagc
aagatggacaacagaacacatgcaagagtgatgaccaggtttgccaacagtctcccaatt
aatgaccctctgcagactgtttaccagctcatgtctggaaggatgccagctgcatccacg
tgctgtggagatgagaaatggggagactggaggccacatctagctatggtgttatccaac
ttgactaataacgtggacttggaatccaggaccattgctaccatgggagacactcttgct
tctaaaggcctgctggatgctgctcacttttgttaccttatggcccaagttggttttgga
gtttacacgaggaagacaacaaagcttgtcctcattggatcaaatcacagcttgccattt
ttgaagtttgccaccaatgaagctattcaaagaacagaagcctatgaatatgcacagtca
ctgggaacccagcctggctgcttgcccaatttccaggttttcaaattcatctatgcttgc
cgcctagctgaaatgggacttgctgctcaggctttccattattgtgaagtgatttccaga
actgtccttaaaaatccgcagtactattcacctgtacttattggccagctaatccagatg
tcatcgcagctgcgcctgtttgatccccagataaaagagaaacctgaccaggaatccttt
gttgaaccttcatggttagtaaggcttcgacacgtggatggacagatcaaggaaggggca
atagcttacagcacagacagatccacaccacagcagtacccgtgcagcacaccaagctct
gaattggaccatcccagtcaatatgatggagcaggagttggccacgacgtgggcccaggt
gctgaaaatgccttgttagcatctttgttgcccaacatggctcagcagatgcaaagcgtg
cagctgatgccttcagctcctcaggctatacttgatgggtcagctgctgggattcctcct
ggtgaccaggatgctgtccaaagtgtccctttctatcccgtggcctctcagcctattggg
ccaggacctggctttgcacctccagggttttcaaatcagtacggagctgagccatcacca
ctgtatttagggtcaacgctgccaccaggagggccaccacaagaaactgaaccacaggaa
gaggagcagatgaacctggaaacaggaatgcagagaattgcctcagagtctccttcacga
aactctttccctgaacagagagaggaagatttctacaacagaatggctagaatggcacca
gaacgaagatccagatctgcatctcagtcttcagcatatatgggctatggacaaagatcc
cggacaacttcagagtcctctgctcattctgtgggacgagagagatctaactctgcagca
aagcagccgcctccttctccacctgatcctgtagggaaggagactaagaaagaagtgaaa
aaagagccagcatctagaaagactggtgcaaactggtttcgctggctgatgggaaaagga
aagaatgaagctcaccttccagacgacaagaacaaatcaattgtttgggatgaaaagaag
caacgttgggttaatttggatgagccagaagaagagagtaagcctccacctccacctcca
acaggatttcctaaagttcctcaggctgctccatctgggcctggaggcccacccagtgcc
cctgtcaacatgttctctagaagagcagcaggaagcagagcccgttatgttgatgttctg
aatccaggtggaaccaaggcaggcggtgctgttcctgcaccatcagacctgtttgcacct
ctggcaccaatgccaattcctgccaatgtatttgttccaaacgcagttccaggggaccct
cagccagtggaaggcagtggtgcagcagagcaaacgccagctgcaaaccaaaccaaccca
gatccatctgcagctgttgatcaagagtatttaaaccctgcagtggttccacctggatct
gggcttcccgtttccaaccctgatggcttccaaccaggcgagctttcgcgctctagttca
atgagttcattatcacgtgaagtaagccagcattttaatcagcctgctcctgcaccgcct
tcgggggagccatcagcaggagcagtacagttctacaatccttctcaatttgcacaatct
cctgcagtcactggaagttcaaggccaggaagaattgggcagaggaagtatccgacattg
aagtag
DBGET
integrated database retrieval system
