Tympanuchus pallidicinctus (lesser prairie-chicken): 128073311
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Entry
128073311 CDS
T08967
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03320
PPAR signaling pathway
tpai04148
Efferocytosis
tpai04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128073311 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128073311 (RXRA)
03320 PPAR signaling pathway
128073311 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128073311 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tpai03310
]
128073311 (RXRA)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128073311 (RXRA)
Nuclear receptors [BR:
tpai03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128073311 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
DUF6021
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
128073311
NCBI-ProteinID:
XP_052524021
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccactggatttctcaaaccaagtgaattccacatccctg
aactccccgacgagccgaggccccatggccaccccatccctgcacccgtccatcgggccg
ggcatcggctcctcgttgggctccccaggccagctgcactcacccatcagcaccctgagc
tcacccatcaatggcatggggccacccttctccgttatcagttcccccatgggcccacac
tcgatgtctgtcccctccacgcccagcctgggattcggcaccagcagcccacagctcaac
tcacccatgaaccccgtcagcagctcagaagacatcaagccacccctggggctcaatgga
gtcctcaaagtgccagcacatccctcaggaacaatggcctccttcaccaagcacatatgt
gccatttgcggggacagatcttcaggtaaacattatggggtgtacagctgcgagggctgc
aaaggcttcttcaaacgcacggtgaggaaggacctgacctacacctgccgtgacaacaag
gactgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
cttgccatggggatgaagagggaagctgtgcaggaggagaggcagcgggggaaagaccgc
aacgagaacgaggtggagtccacaagtagcgccaatgaggacatgcctgtggagaagatc
ctggaagcagaactcgctgtggagccaaagacagagacgtacattgaggcaaacatgggc
ctgacgccgagctcgcccaacgacccggtgacaaacatttgccaggcggccgacaagcag
ctcttcaccttggtggagtgggccaagaggatcccccatttctcagagctgcccctggat
gaccaggtcatcctgctgcgagcagggtggaatgagctcctcatcgcctccttctcccac
cgctccatagctgtgaaggatgggatcctgctggccaccgggctgcacgtgcaccgcaac
agcgcgcacagcgccggcgtcggggccatctttgacagagtactgacagaactcgtgtcg
aagatgcgagacatgcagatggacaagacagagctgggctgcctgcgagccatcgtcctc
ttcaaccccgactcaaaaggtctctccaacccggctgaagtggaggcgttaagggagaag
gtgtacgcgtcgctggaggcgtactgcaagcacaaataccccgaccagcctgggaggttc
gccaagctcctgctccgcctgccagccctgcggtccatcggcctcaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgccgatcgacaccttcttgatggaaatgctg
gaagcaccccatcaaatgacttag
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