Tympanuchus pallidicinctus (lesser prairie-chicken): 128076859
Help
Entry
128076859 CDS
T08967
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128076859 (RIMS1)
Membrane trafficking [BR:
tpai04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
128076859 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
128076859 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FYVE_2
PDZ
PDZ_6
Nudix_N_2
Motif
Other DBs
NCBI-GeneID:
128076859
NCBI-ProteinID:
XP_052531095
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MSSSAGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGASSDAPR
EKKARLQERSRSQTPLSTAAASSQEISPSTVQSDQRKGADVSQPAMGLEQKQVSSRSRSE
PPRERKKMLVSDQNGKVVKGERKRVPKASLQKEGPAGDRERKERHENRRLEKGKSQDYPD
LPEKLEEGKVPDDEKQRKEDEYHTRYRSDPNLARYPVKPHPEEQQMRMHAKVSKARHERR
HSDVALPHTEMEEAEVPENNLGKRSQLQGTQDRKSLVETQRSYSIDRTGDVRISVSKQLT
NHSPPTPRHSPVPIEHVEYKNHDTFKKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQ
SESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYY
WLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKM
TELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQV
EIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALRDAPQVLPGQ
LSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSL
EPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWY
KLQTHDESSLPLPQPSPFMPRRHVHGGESSSKKLQRSRPISDSDISDYDVDDGIGVVPPV
GYRSSTRESRSTTLTVPEQQRTTHHRSRSVSPHRGDDQGRTRSRLPNVPSQRSLDEIHQM
RRSRSPTRHHEASRSPADYRSRDMDSQYLSDQESELLMLPRAKRGRSAECLHTISSTLPA
CAKTKSVVRQDISLLRDCLNSRIPKFGDDLLVSELQPSLDRARSASTNCLRPDTSLHSPE
RERGRWSPSLERRRPTSPRIHIQHASPEDDRTRTLESCIPKQDSVDHLSAKLGAAQRQSR
KVERYSSQKQARKGSAAETERGLLPCLSRRGFPAPRTTEQPVIRGKHHARSRSSEHSSVR
ALCSVHHLAPGGSAPPSPLLTRIHQQGSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQE
QENYYSSTKASLVVEERTRQMKMKVHRYNQTSGSGSSQEHEREQYTKYNIQTDQYRSCDN
VSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPWGRISTFTPKMQGRRMGTSGRI
IKSTSVSGEMYKLEHNDGSQSDTAVGMVGTGGKKRRSSLSAKVVAIVSRRSRSTSQLSQT
EAGNKKLKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADS
QFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPA
PYVKVYLLENGACIAKKKTRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDYGRMDHKC
FMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggcggggccccgcggccctcggccacccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaagagaggaacattatcatggcagtgatg
gaccggcagaaagaggaggaagagaaggaagaggccatgctcaagaggttgcatcaacaa
tttgaaagctataaagagcaagtaagaaagataggggaagaagcccgccgttaccaggga
gagcacaaggatgatgctccaacatgtggaatctgtcataaaacaaagtttgcagatggt
tgtggccatttatgctcttattgccggaccaagttttgtgctcgatgtggaggtcgtgtc
tctctgcgatcaaacaatgaggacaaagtggttatgtgggtatgcaatttatgtcgaaag
caacaagaaatcttaacaaaatccggagcgtggttttttggaagtggaccacagccatca
cccagccaggatggaacactgagtgatacggcaactggtgcaagctctgatgcaccgaga
gaaaagaaagccaggcttcaagagaggtcaagatcacagactcctttaagtacagcagct
gcctcatcacaggagatctctccttccactgttcaatccgatcagaggaaaggagctgac
gtatcgcagccagctatgggcctggagcaaaagcaagtttcatcaaggtctagaagtgag
cctccaagagagaggaagaagatgttggtttcagaccagaatggcaaagttgtaaagggt
gagcgtaagcgtgtgccaaaagcctcacttcaaaaagaaggaccagcaggtgatagggaa
cgtaaagaaaggcatgaaaatagaagactggaaaaagggaagtcacaagactatcccgac
ttgccagaaaaacttgaggaaggcaaagtgcctgatgatgaaaaacaaaggaaggaagat
gaatatcatactcggtacaggagtgaccccaatctggcaagataccctgttaaaccacat
cctgaggaacagcaaatgcgcatgcatgccaaggtttctaaagcacggcatgagagaaga
cacagtgatgtagctttgccacacacagaaatggaggaagcggaggtacctgagaataac
ttaggaaaacgctcacaattacagggaactcaggacagaaaatctcttgtggaaactcag
aggtcgtactctatagacagaacaggtgatgtaagaatttctgtttctaaacaattaact
aatcatagtccaccaactcccaggcatagtccagttcccatagagcacgtagaatacaag
aaccacgatacctttaaaaaacagagccgccttgatcctagctctgctattctcatgcga
aaagcaaagcgggagaaaatggagaccatgctaaggaatgattcccttagctctgaccag
tcggaatcagtgcggccatcccctccaaagcctcatagagcaaaaagaggcggaaagaaa
aggcagatgtcagttagtagctcagaggaagaaggggcatcaacaccagaatatactagc
tgtgaagatgtggagatagaaagtgaaagtgtcagtgaaaaaggtgacttggattattac
tggctggatcctgccacgtggcacagcagggagacatctcctattagttcgcatccagta
acgtggcagccttctaaagagggagatcgcttaattgggcgtgttattcttaacaagaga
acaaccatgccaaaagaatcaggtgcattactggggctaaaagttgttggaggaaaaatg
acagaattaggacgactcggtgccttcattaccaaagtgaagaaaggtagcttggctgat
gtggtggggcatctcagagcaggagatgaagttctagaatggaatggtaaacccttgcct
ggagctacaaatgaagaagtttacaacattattttagaatcaaagtcagaacctcaagtt
gaaattattgtttcgaggcctattggtgatattcctcggattcctgagagttctcatccc
ccattagagtccagttcaagttcttttgaatctcagaagatggaaagaccttctatttct
gttatttctccaaccagccctggagccctacgggatgcaccacaagtcctaccagggcag
ctttctgtgaaactgtggtatgacaaggtgggacatcagttaatagtgaatgttctacaa
gcaacagatttgccaccaagagtagatggacggccaaggaatccctatgtaaaaatgtat
tttcttccagacaggagtgataaaagtaaaaggaggaccaaaacagtaaagaaaagtcta
gagccaaaatggaaccaaacttttctctactcgcatgtccatcgtagagattttagagaa
agaatgcttgaaataacagtatgggatcagccaagagtccaagaagaagagagtgaattc
cttggagagattctaatagagctggagacagcgcttttagatgatgaaccacattggtat
aagctacagacacatgatgaatcttcactacctctgcctcagccatcacctttcatgcca
agaagacatgtccatggtggagaaagctctagcaaaaaattacagagatctcggccaatc
agtgatagtgacatctcagattatgatgttgatgatggtattggagttgttcctccagta
ggttatagatctagcactagagaaagtagatctacaacactaactgtgccagaacagcaa
agaacaacacatcatcgttcacgatctgtatctcctcaccgtggcgacgatcagggcagg
acccgttcacgtttaccaaatgtgccatcacagaggagtttagatgaaattcatcaaatg
agaagatcacgttctccaactagacaccatgaggcctccagaagtccagctgattacaga
tccagagacatggacagtcagtatttgtctgatcaagaaagtgagcttcttatgctgccc
agagcaaaacgaggaagaagtgcagagtgcctacataccatcagctcaactcttcctgca
tgtgctaagaccaaatcagtggttagacaggatatttctctccttcgtgattgccttaat
tcacgaattccgaaatttggagatgatctactggttagtgaactacagccctcccttgac
agggctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaa
cgagaaaggggtagatggtccccctccctagagaggagacgacctactagtcccaggatt
catatccagcatgcatctccggaggatgacagaacaaggacgctggagtcttgcattcca
aaacaggacagtgtagaccacctaagtgctaaacttggagcagcacagaggcagtccaga
aaagtggaaagatatagcagccaaaaacaagctaggaaaggctccgcagctgaaacagaa
aggggtctgctaccatgtctttctagaaggggatttccagccccacgaacaactgaacag
ccagtcattaggggaaaacatcacgctcgctccaggtcgagtgagcactctagtgtcaga
gccttatgctctgtgcatcaccttgcgcccggaggctcggctccaccttctccacttctg
acaagaatacatcaacaaggaagtcccacccagtctcctcctgcagacacatccttcagc
agtcgcaggggaagacagctaccgcaagttccagtaagaagtggcagtatagagcaagaa
caagagaattattactcttccacaaaagcaagcttagtagtggaggagcgaacaaggcag
atgaaaatgaaagtgcaccgttataatcagacgtcagggtctggttctagtcaagaacat
gagcgtgagcaatataccaagtataacatacaaacagatcagtacagaagttgtgataac
gtctctgccaaatcatcagatagtgatgtcagtgacgtatcagccatttcgcgaaccagc
agtgcctcacgcctcagcagcacaagttttatgtcagagcaatctgaacgcccttggggc
agaatcagtacatttactcctaaaatgcaaggcagacggatggggacttcagggagaatc
attaagagcacaagtgtgagcggagagatgtataagctggagcacaatgatgggagtcag
tcggacacggctgtcggcatggttggaacaggtgggaagaaaaggcgttccagtcttagt
gccaaagtggttgccatagtgtctcgaaggagcagaagcacatctcaacttagccaaaca
gaggctggcaataagaagctaaagagcacgatacaaagaagcacagagacaggaatggct
gcagagatgagaagtcgtatggttcgacagccaagtcgagaatccactgatggcagcata
aatagttacagctctgagggcaacttaatatttcctggggtacggctgggcgctgacagt
cagttcagtgatttccttgatggacttggacctgcacaattagtaggccgacaaacacta
gcaactcctgccatgggtgatatccagattggcatggtggataagaagggccagttagaa
gtagaggtcattagagcccgtggcctcacacaaaaacctggctccaaatctaccccagct
ccatatgtcaaagtttatttattggaaaatggagcatgtatagcaaagaagaagacaaga
attgcacggaagacccttgatcctttgtaccaacagacactagtttttgatgaaagtcca
cagggtaaagtccttcaggtaatagtctggggagactatggccgaatggatcacaaatgc
ttcatgggtgttgcccagatccttctggaggaattagatctgtccagtgtggtaataggc
tggtataaattattcccaccttcatcactagtggatccaaccttgactcccttgacacgc
agagcttcccagtcgtctctggaaagttcaactgggcctccctgcattaggtcatag
DBGET
integrated database retrieval system
