KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128079775
Entry
128079775         CDS       T08967                                 
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010  MAPK signaling pathway
tpai04137  Mitophagy - animal
tpai04141  Protein processing in endoplasmic reticulum
tpai04210  Apoptosis
tpai04217  Necroptosis
tpai04621  NOD-like receptor signaling pathway
tpai04622  RIG-I-like receptor signaling pathway
tpai04920  Adipocytokine signaling pathway
tpai05132  Salmonella infection
tpai05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128079775 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128079775 (TRAF2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    128079775 (TRAF2)
  09143 Cell growth and death
   04210 Apoptosis
    128079775 (TRAF2)
   04217 Necroptosis
    128079775 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    128079775 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    128079775 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    128079775 (TRAF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128079775 (TRAF2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128079775 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpai03019]
    128079775 (TRAF2)
   04121 Ubiquitin system [BR:tpai04121]
    128079775 (TRAF2)
Enzymes [BR:tpai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128079775 (TRAF2)
Messenger RNA biogenesis [BR:tpai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     128079775 (TRAF2)
Ubiquitin system [BR:tpai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    128079775 (TRAF2)
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-RING_6 CEP104_ZnF zf-C3HC4_5 Thioredoxin_3 zf-C3HC4_4 zf-C3HC4_2 Sina_ZnF
Other DBs
NCBI-GeneID: 128079775
NCBI-ProteinID: XP_052537273
LinkDB
Position
Unknown
AA seq 544 aa
MALCVQALGVQPEFFVPMAAANSTPPGSLELNQPGFAKEILGTKLEVKYLCSDCRNILRR
PFQAQCGHRYCSYCLKKIISSGPQKCASCIQEGIYEEGVSILETSSAFPDNAARREVESL
PAVCINEGCTWKGTIKEYESCHEGNCPFLLIECQACRAVIPLNEKERHSERECPERTLNC
KYCKSLFYFPDIKAHDEVCPKFPLTCDGCGKKKIPREKFQDHVKNCGKCKVPCRFEVVGC
AEMVENEKLPEHESKCLAEHLYMLLSFVLSLKSGSAGLKHLPALPSSQSGSPLLAANSLC
PESELFKSLELLGRCDALEKKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQEQIETL
SNKVRQLERSIGLKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIF
SPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQ
NNREHIIDAFRPDVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVD
LSGL
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggcgctgtgcgtgcaggctctgggtgtacagccggaattttttgttcccatggcagca
gcaaattcgactccgcccggctctctggaactgaaccagcccgggtttgcgaaggagatc
ctgggaacgaaactggaggtgaagtacctctgctcggactgcaggaacatactgaggcgg
cccttccaggctcagtgcgggcatcgctactgctcctattgcttgaagaaaattataagt
tctgggcctcaaaagtgtgcaagctgcattcaagaaggaatatatgaagaaggagtttct
attttggaaaccagctctgctttcccagacaacgcagctcgccgggaggtggaaagtctg
cctgcagtctgtattaacgagggctgcacgtggaaggggactattaaggaatatgagagc
tgccatgaggggaactgcccgttcctgctgattgagtgccaggcatgcagggctgtgatc
cctctgaatgagaaggagcgccactctgagcgggagtgccccgagagaaccctcaactgc
aaatactgcaaatcacttttctacttcccagatattaaggctcacgatgaggtctgccca
aaatttccactgacttgtgatggctgcgggaagaagaagatccccagagagaagtttcag
gaccacgtgaagaattgtggcaaatgtaaagtgccttgcagattcgaggttgtcggctgt
gctgagatggtggaaaatgaaaagctaccagaacacgaaagcaagtgtctggcagagcat
ctgtacatgctgctgagttttgtgctcagcctcaagagtggatccgcaggcctgaagcac
cttcctgcccttccctcatcgcagagcggctccccgctgctggcagcaaactccctgtgc
ccagagtcggagctcttcaagtccctggagctcttgggaaggtgcgacgccctggagaag
aaaacagtgacctttgagaacattgtctgcgtgctcaatagagaggtggaaagggtgtct
ctgacagcagaggcgtacagccggcagcaccgactggaccaggagcagatcgagacgctg
agtaacaaggtccggcagctggaaaggagcattgggctgaaagacctggccatggctgag
atggaggaaaagatccgcaacatggaggcttccacctacgacggcgttttcatctggaag
ataacagagtttgccaggaagcgccaggaggcgatcacaggccgctctcctgccatcttc
tctccagctttctacacaagcaagtatggctacaagatgtgtctgcgcgtttacctgaat
ggggacggcaccgggcgtgggacccacctgtccctgttcttcgtggtgatgaaaggaccc
aacgacgcgctgctgcgctggcccttcaaccagaaggtgaccctgatgctcttggatcag
aacaaccgggagcacatcatcgatgcgttccgacccgacgtgacctcctcctccttccag
cgcccggtcacagagatgaacattgccagcggctgcccgctgttctgccccgtctccgtg
atggaagccaagaactcctacgtccgcgatgatgccatcttcattaaagccatcgttgac
ctctcaggcctttaa

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