Tympanuchus pallidicinctus (lesser prairie-chicken): 128080149
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Entry
128080149 CDS
T08967
Symbol
PCM1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128080149 (PCM1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpai03037
]
128080149 (PCM1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
128080149 (PCM1)
Cilium and associated proteins [BR:
tpai03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128080149 (PCM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCM1_C
Motif
Other DBs
NCBI-GeneID:
128080149
NCBI-ProteinID:
XP_052537999
LinkDB
All DBs
Position
Unknown
AA seq
2070 aa
AA seq
DB search
MATGGGPFEEGMNDQDLPSWSNESLDDRLNNTDWGSQQKKANRSSEKNKKKLGGEAETRL
TNDISPESSPGMGRRKTRTPHTFPHARYVTQMSVPEQAELERLKQRINFSDLDQRSIGSD
SQGRATAANNKRQLNESKKPFNFLSLQINTNKSKDPVSGSQKKESGEPLQCKDLFGAALN
KDFFQNGQLSVQEDGRGEPAMDSSQIVSRLVQIRDYIAKASYMRDDLVEKNERSANVERL
SHLIDHLKEQEKSYLKFLQKMLARENEDDGVWTIDSAVGSGSIGESTSLNTDVQAEASYT
MARDPQQEAKEELENLKKQHDLLKRMLQQQEQLKALQGRQAALLALQHKAEQAVAVVDES
VVTETTGSVSGVSLTSELNEELIDLIQRFHNQLHDSQTQSVPDNRRQAESLSLTREISQS
RNSSVSEHRSDEKAQLFNKMRMLQGKKQKMDKLLGELHTLRDQHLNNSSFFPASSSPQRS
IDQRSTTSAASAPVGIVTVINGESNSLASAPYPPDSLASQNESEEDDNLNPTEKLQKLNE
VRKRLNELRELVHYYEQTSDMMTDAVNENTKEEEETEDSGSDSEHGDPQPVTNIRNPQGI
SSWSEINSNSNVQCGTNNRDGRHLNTDCEINNRSAANIRTLKISSTLDCHNREDDKDTDL
PQGDDDEVEEDRASEDSISSHRSSLGDVAGDAEFEQKINRLMAAKQKLRQLQNLAAMVQD
DDPEPQVLTANASNMGDFLGEMEERKQQPNNVRVSTNKLQKDVGLNEKAREKFYEAKLQQ
QQQELKQLQEERRKLMEIQEKIEVLQKACPDLQSAGLGNSPANRQTPPAASNPAMNECNT
AGKPLLEFGESVPVGNELWSEMRRHEILREELRRRRKQLEALMAEHQRRRELAETISTVA
ASVKSEGSEIQHTPQQSRTENRTMATWGGSTQCALDEEDGDEDGYLSDGLDQAEEEEDAP
SMNDSYSVYPNNQIPESVYYLKGNKDRWKNCRPLSADGNYRPMSKTRQQQNISMRRQENF
RWISELSYVEEKEQWQEQINQLKKQLEFSVSICQTLMQDQQTLSCFLQTLLAGPYNMMPN
NVASSQVHLIMHQLNQCYTQLSWQQNNVQRLKQMLNDLMHQQEQQCQEKPSRKERGSSAP
PPPSPVFCPFSFPPQPVNLFNIPGFTNISSFAPGINYNPVFPSGFGDFARSGFPQSSEQQ
QHPLDHNTSGKTEYMAFPKPFESSSSNGAENQRSHRQPEDEMEKRSAWLNDSQEVKKDDQ
SQLKAGFPVSVQSTASGHKNHSDTSRRRNFDEESLESFSSMPDPVDPTTVTKTFRSRKAS
AQASLASKDKTPKSKNKRKNSSQLKGRIKNTGYDSASASSVCEPYKSTKSKHSEEVVHAK
VFSKKNREQLEKIIKYSRSTEMSSAHARRILQQSNRNACIEAPETGSDLSMFEALRDTIY
SEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALYALQDIVTRHLSENNEKGKCIKS
LNTATWIASNSELTPSESLASTDDETFDKNFPTEACQDCEQNDADNGSTMSTSSHFEPFA
TDDLGNTVIHLDQALARMREYERMKIEAESTLGSEGCSSNFQGATAAKLEGPSTSECLSV
PQSSDVSAVPCPRIDTQQLDRQIKAIMKEVIPFLKEHMDEVCSSQLLTSVRRMVLTLTQQ
NDESKEFVKFFHKQLGSILQDSLAKFAGRKLKDCGEDLLVEISEVLFNELAFFKLMQDLD
SNSISVKQRCKRKIETAEEMQSYAKEAEKGLQVDVCSFTEDVDEDKDKDETEIVKPVQGL
ETYDGNEVPESVKSDASDQEEDEESESGPVAISLSKAETQALTNYGSGEDENEDEEIEFE
EGPVDVQTSLQASNETATENEQTSSQELNKSKGSDILSSEQQSVKGEEDAATMLPHYLNV
VENTPPLAVNTPESFITASMNAEESSSSLPENETQMLDAACVVNKSSAGSSESSMAGSPD
TESPVLVNEYEAGSGNISQKSDEDDFVKVEDLPLKLAVYSEADLLKKIASEAQTNSLSDE
LLDGGGQQDRELVGDAQTLKEPETFGAQSA
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggaggcggcccatttgaagaaggcatgaatgatcaagacttgcctagctgg
agtaatgagagccttgatgaccggctgaacaacacggactggggaagtcaacagaaaaaa
gcaaacagatcatcagaaaaaaacaagaaaaagcttggtggagaagctgaaacaaggctt
actaatgatatatctccagaatcttcacctggaatgggacgacgaaagaccagaactcct
cacacttttcctcatgctcgatatgtgacccagatgtctgttccagagcaggctgaatta
gaaagacttaaacaaagaataaacttcagtgatctggatcagagaagcattggaagtgat
tctcaaggcagggcgactgctgctaacaacaaacgtcaacttaatgaaagcaaaaaaccg
ttcaacttcttgtcactgcagataaacactaacaaaagcaaagatcctgtgtcaggttcc
caaaaaaaggaaagtggggagccattgcaatgcaaagacctgtttggagctgctctaaac
aaagatttctttcaaaatggtcagctgtctgttcaagaagatggaagaggagaaccagct
atggatagtagccagattgtcagcagactagttcaaattcgcgactatattgctaaggcc
agctacatgcgggatgatcttgtagagaaaaatgaaagatcggccaatgttgagcgttta
tcacaccttatagatcaccttaaagagcaggagaaatcctatctgaaatttttgcaaaag
atgcttgctagagaaaatgaggatgatggtgtttggactatagattcagctgtgggatct
ggttctataggtgagagcacatcgctaaacactgatgtgcaagctgaggcatcatatacc
atggccagagatcctcaacaggaagctaaagaggagttggagaacttgaagaagcagcac
gatttattgaaaaggatgctacaacagcaggaacaattgaaggctcttcaaggaagacag
gcagctcttcttgctttgcagcataaagcagagcaagcggttgctgttgtggatgagtct
gtggtaacagagacaacaggtagtgtttctggagtaagccttacatcagaattgaatgaa
gaattaattgacttaattcagcgctttcataaccaacttcatgattctcagactcagtct
gtaccagacaatagaaggcaagcagaaagtctttcacttaccagagagatttcacaaagc
cgaaactcttcagtgtcagaacaccggtcagatgaaaaggcacagcttttcaacaagatg
cgaatgttgcaggggaaaaagcaaaaaatggataaactgttaggagaactgcatacgctt
cgtgaccaacatctaaataattcctccttttttccagcttcaagttctcctcagagaagt
attgaccaaagaagtacaacttcagctgcttctgctcctgtgggcatagtaactgttatc
aatggtgaatcaaatagtctggcatctgctccctatcctcctgattccctggcttctcag
aatgagagtgaagaggatgacaatctaaatccaacagaaaagcttcagaagctaaatgag
gttcgtaagagactgaatgagttacgtgagctagttcactactatgagcaaacatctgat
atgatgacagatgctgtgaatgaaaacactaaggaagaggaagaaacagaggactcggga
agtgattctgaacatggggatccacagcctgttacaaatattagaaaccctcaaggaatc
agtagttggagtgaaataaatagcaactcaaatgtacagtgtggaactaataacagagat
ggaagacatcttaatacagactgtgaaataaataatcgatctgctgctaatataaggact
ctaaaaatatcttctactctagactgtcataatagggaggatgacaaagatactgaccta
ccccaaggtgacgacgatgaagtggaagaagatagagctagtgaagattccatatctagt
cacagaagcagcctgggtgatgttgcaggagatgctgagtttgagcagaagattaatagg
cttatggctgcaaagcagaaacttcgacagttgcaaaaccttgctgctatggtgcaggat
gatgacccagaacctcaagtactcactgcaaatgcatctaacatgggtgactttttgggt
gagatggaagagagaaagcaacaaccaaacaatgttcgagttagtaccaataagttgcaa
aaagatgtaggactgaatgaaaaagcaagagagaagttttatgaagctaaacttcagcag
cagcagcaggaacttaagcagctacaagaagaaagaagaaaactaatggaaattcaagaa
aaaattgaagtgttacagaaagcttgtcctgatcttcaatctgctggcctgggtaacagt
ccagcaaatagacagactccaccagcagcctcaaatccagccatgaatgagtgtaacaca
gctggcaagcctttacttgaatttggtgaatctgtaccagtaggcaatgagttatggtct
gagatgagaagacatgaaattctaagagaagaattgcgacggagaagaaagcaacttgaa
gctttaatggctgaacatcagaggaggagagaactggcagaaacaatatctactgttgct
gcatcagttaaaagtgaggggtcagaaattcagcatactccccagcagagtaggacagag
aataggacaatggctacctggggaggttctacccagtgtgcactagatgaagaggatgga
gatgaagatggttatctctctgatggacttgaccaggcagaagaggaggaagatgcgcca
agtatgaatgacagctattctgtttatcccaataaccaaataccagaaagtgtgtattat
cttaaaggaaataaggacaggtggaaaaattgccgtcctctttcagcagatgggaattat
cgaccaatgtctaaaactaggcagcagcaaaacatcagtatgagacgccaggaaaacttt
cggtggatatcggagctttcttatgtggaagaaaaagaacaatggcaagaacagatcaat
cagctgaagaaacagcttgaatttagtgttagcatttgccagactttaatgcaagatcag
cagactctatcctgttttctacagactttgcttgcaggcccatacaatatgatgcccaat
aatgttgcatcttcacaagtacatcttattatgcatcagttaaaccagtgttatactcaa
ctgtcttggcagcagaataacgtccaaagattgaaacaaatgctaaatgatttaatgcac
cagcaagaacaacagtgtcaagagaagccatcaagaaaagagagaggcagtagtgcacca
ccacctccatctcctgttttctgtccattcagctttcctccacagcctgtgaacctgttt
aatataccgggatttactaatatttcttcatttgctccaggtataaactacaatccagtg
tttccttctggctttggagattttgcacgcagtggttttccacaaagcagtgagcagcag
caacatcctctagatcataatacttctggaaaaactgaatatatggcattccccaaacct
tttgaaagcagttcctctaatggagcagaaaaccaaaggagtcataggcaacctgaagat
gaaatggaaaaaagatcagcttggcttaatgatagccaggaagtgaaaaaagatgatcaa
tctcaactgaaagcaggctttccagtttcagtacagagcactgcttcgggtcataaaaat
cactctgatacgagcaggagaagaaactttgatgaagagtccttggagagttttagtagt
atgcctgatccagttgacccaactactgtgacaaagacatttagatctaggaaagcttca
gctcaggcaagcttggcatcaaaagataaaacacccaaatcgaagaataagaggaagaat
tcttctcagctaaaaggcagaattaagaatactggttatgacagtgcgagtgcttctagt
gtgtgtgaaccctacaaaagcactaaaagtaaacactctgaggaggttgttcatgcaaag
gtgttcagcaagaagaaccgggaacaactggaaaaaataattaaatacagtagatctact
gaaatgtcttcagcacatgctaggagaattctgcagcagtctaacagaaatgcatgcatt
gaagcaccagaaactggtagtgatctttctatgtttgaagctttgcgggacacaatttat
tctgaagtcgcaactcttatttctcaaaatgagtctcggccccactttcttattgaactt
ttccatgagctacagctgttaaacacagattacctaagacagagggccctatatgcttta
caggatatagtgaccagacatttatctgagaacaacgagaaggggaaatgcataaaatct
ctaaatactgcaacatggatagcatcaaactctgaactcactcccagtgaaagtcttgct
tctacagatgatgaaacgtttgacaagaacttccctacagaagcatgtcaggactgtgaa
caaaatgatgcagacaatgggagtactatgtctacatcttcacattttgaaccctttgcc
actgatgatcttggcaacacagtgattcacttagatcaagctttggctaggatgagggaa
tatgagcgtatgaaaattgaagctgaaagtacccttggctctgagggctgctctagtaat
tttcagggtgctactgctgctaaattagaaggtcccagcacgagtgaatgtctttctgtg
ccacagtcaagtgatgtttctgctgtcccatgtcctcgcatagacactcagcagcttgac
cggcagattaaagcaattatgaaagaggtcattccttttctgaaggaacacatggatgaa
gtatgttcttctcagttactgacatcagtaagacgtatggtcttgactcttacacaacag
aatgatgaaagtaaagaatttgtcaagttctttcataagcaacttggcagtattcttcag
gattccctggcaaaatttgctggtagaaaattaaaagattgtggggaagatcttcttgtg
gagatttctgaagtattatttaatgaattagcgttttttaaactcatgcaagacttggac
agtaacagtatttctgtaaagcagaggtgtaaacgcaaaatagaaactgccgaagagatg
cagtcttatgctaaagaggcagaaaaaggtctccaggtggatgtttgttcatttactgaa
gatgtcgatgaggacaaagacaaggatgagactgaaattgtcaaaccagtacagggctta
gaaacgtatgatggtaatgaagttcctgaaagcgtcaagtctgatgcttctgaccaagag
gaagatgaagaaagtgagagtggcccagtggcaataagtttatcaaaagcagaaacgcaa
gctctcactaattatggcagtggagaagatgagaatgaggatgaagaaatagaatttgag
gaaggacctgttgatgtgcagacatcgttacaagcgagcaatgaaacagcaactgaaaat
gaacagacttcaagccaggaactgaataagtcaaaaggcagtgatattttgtcatctgaa
caacaatctgttaaaggtgaagaagatgcagctacaatgttacctcattacctcaacgtg
gtggagaacacaccacctttagcagtgaatactccagaatcgtttataacagccagtatg
aacgcggaagaatcaagctcatctttaccagaaaatgaaacacaaatgctagatgcagca
tgtgtagtaaacaagtcctctgctggaagttcagaaagctccatggctggcagtcctgac
acagagtcgcctgtgttggtgaatgaatatgaagctggttctggaaatataagtcaaaaa
tctgatgaagatgactttgtgaaggttgaagacttgccccttaaacttgcagtctattca
gaggcagatttattgaagaaaatagcatcagaggcccaaaccaacagcttgtctgatgaa
ttattggatggaggtgggcagcaagatcgagaattagttggagatgcccagactctgaaa
gaaccagaaacttttggagctcaaagtgcatga
DBGET
integrated database retrieval system
