Tympanuchus pallidicinctus (lesser prairie-chicken): 128082152
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Entry
128082152 CDS
T08967
Symbol
TRAF5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04217
Necroptosis
tpai04621
NOD-like receptor signaling pathway
tpai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128082152 (TRAF5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128082152 (TRAF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128082152 (TRAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128082152 (TRAF5)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128082152 (TRAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-ACC
zf-C3HC4
zf-TRAF_2
DUF4941
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_6
Caprin-1_C
Sina_ZnF
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
128082152
NCBI-ProteinID:
XP_052541992
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MACEELTAVSGIFTRQNSASAVSLDFEPNTDYKFVETLEDRYKCAYCHLVLHNPHQTGCG
HRFCQQCILTLRELNAVPTCPVDKETIKMHEVFKDNCCKREVLNLYVFCKNFPDCNSKII
LGRYQEHLQQCLFESVQCTNDGCCDQILRKDLKDHLNQHCKFREEMCQYCNKHVVLMNIK
NHEENDCPDYPMPCLQNCSQIILKKEIEKHHTVCPETEVDCPYKQYGCHIKVKRGKLAEH
ENGALREHMLQILDKNSRLEEQISDLYKSLECKEIKIQQLAEAVKKCEKEFRQFTQLFGK
NSNLMVSTQALASHLDKSARLESQVKQLIQMANQQQSKLDLRPLFDTIENVKQKIALMET
YDQRLVVLESQSSKHDLQINIHKAQLNKNEERFKLLEGTCYNGKLIWKITDYKMKKKEAM
EGRVLSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHVSLYFVVMRGEFDSLLPWPFKQK
VTLMLLDQTGKKNHIVEVFRADPNSSSFKRPDGEMNIASGCPRFVPHTVLENTKNTYVRD
DTLFLKVVVDLTDLEEL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgaggaactcactgctgtctcgggcatctttacgcgccagaactctgctagt
gctgtttctctggacttcgaacccaacactgactacaagtttgtggaaaccttagaggac
cggtacaagtgtgcctactgccacttagtccttcacaatccccaccagacaggatgtggg
caccggttttgtcagcagtgcattctcactttgcgagaactgaatgcagtacccacatgt
cctgtcgacaaagaaacaataaaaatgcacgaggtattcaaggacaactgttgtaaaaga
gaagttctcaacttgtacgtgttctgcaaaaacttccctgactgcaattcaaaaataatt
ctggggcggtatcaggaacatcttcagcagtgcttgtttgaaagcgtgcagtgcactaat
gatggatgttgtgatcaaatccttcggaaagatttgaaagatcatttgaatcagcactgt
aaatttcgagaagaaatgtgtcagtactgtaataaacacgtggtgttaatgaacataaag
aatcatgaggaaaatgactgtcctgattatcccatgccttgtctccaaaactgttcacag
ataattctgaaaaaggagattgaaaagcatcatactgtgtgtcctgagactgaagtggac
tgcccatacaaacagtatggctgccatataaaggtgaaaagagggaaacttgctgaacat
gaaaatggtgccctgcgggaacacatgctgcagattttagacaagaattctagattggaa
gaacaaatctctgacctgtacaagagcctggaatgtaaagagattaaaatccagcagtta
gcagaggctgttaaaaagtgtgagaaagaattcagacagtttacacaactgtttggtaaa
aatagcaacttgatggtaagcacacaggctcttgccagtcatctggataagtctgctcga
ctggaatcgcaggtgaaacagctaatacagatggcaaaccaacaacaaagtaaattagac
ttgagacccctgtttgacacaattgaaaatgtaaaacagaagattgcccttatggagaca
tatgatcagcgcttagttgttttggaaagtcagtccagcaaacatgatctccagatcaat
attcacaaagcacagctcaataaaaacgaagaacgatttaagcttttggaaggcacatgc
tacaacgggaaattaatttggaaaatcacagactacaagatgaagaaaaaagaagcaatg
gaaggtcgtgtcctctccatcttcagccagcccttctacaccagccgctgtgggtacagg
ttgtgtgccagagcctatctgaatggggacggctcaggcaagggaacacatgtctcactc
tactttgttgtcatgagaggcgagttcgactcactgttgccatggcccttcaagcaaaag
gttacactcatgcttttggatcaaactgggaaaaaaaatcacattgtggaagtctttaga
gctgaccccaacagcagcagtttcaaaaggcctgatggagaaatgaatattgcctctggt
tgtccacgctttgtgccacacacagttctggagaacacaaagaatacctatgtcagagat
gacactctgtttttaaaagtagttgtggatctaactgatctggaggaattgtga
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