Tympanuchus pallidicinctus (lesser prairie-chicken): 128083590
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Entry
128083590 CDS
T08967
Name
(RefSeq) transient receptor potential cation channel subfamily V member 2-like isoform X1
KO
K04971
transient receptor potential cation channel subfamily V member 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128083590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128083590
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128083590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128083590
NCBI-ProteinID:
XP_052544988
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MDNFTNDQSGPCQRNRLVGLLETDDTIQEDKPASSTKEERSGQYGKKGEPRPLESPYQKE
SSDYSPKVMINLNYRPGLVSNQKDPNRFDRDRLFSAVSRGSPEALDGLLEYLRRTSKFLT
NSEYTDAKTGKTCLMKALMNLKNGRNDTIPLLLEIDQKTQNPRPLVNVACSDCYYRGQTA
LHIAIERRSLDIVKVLVENGADVHARAHGEFFRKKNEGVCFYFGELPLSLAACTNQFEVV
EYLLNNPHQKARLQEQDTQGNTVLHALVMIADDTEENTKFVSTVYVEILKAGVKTDPTVK
LEEIVNYDGLNPLQLAAKTGKVEIFKHIIQREIKDPVYRHLSRKFTEWTYGPIHVSLYDL
SSLDSFEENSVLEILAYSSDTPNRYKMVVLEPLNKLLQQKWETFASKRFYFSFISYLSFM
IIFTAIAYYQPLRVKPSFPVEFTAGGFLWVSGLIIILLGGVYLIFAQSLYLRRRRQSLKT
MCSDSCVEILIFIQAFSLLLSAVLYGASSENYVAVMVFSLLLGWVNMLYYTRGFQRIGIY
SVMIQKTILRDLLRFLLVYIIFLFGFAAALVTLMGDAPSLSQNKSVAQMESAGSHAMYGG
LLSVSLELFKITIGMGDLDFHEHARFRYFVMLLLLLFVILTYILLLNMLIALMSETVTDI
SGYSKSVWKLQRAIAILEIEKAWLWRQGGKRRSGCLMSVGLNKKDERWCFRVEEIKWTSW
AKEVGVLKQEPGNTNDLEINPEETRSRKQVPQKQLRSAVSEEQSLLQPQLSATEMMPLKG
QTRNL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggataacttcacaaatgatcagtcaggcccatgtcagaggaacaggttggtaggactg
ctagaaacagatgacactatccaggaggataagcctgcatctagtacaaaggaagaaaga
tcaggacaatatggaaagaagggagagccccggcccttggagtcaccttaccagaaggaa
agcagtgactactctcctaaagtcatgattaatctgaactatcggccaggacttgtgagc
aaccaaaaggaccccaatcgctttgacagagacaggctcttcagtgcagtctccaggggc
agccccgaggcactggatggcttacttgagtacttaaggaggacctcaaaatttctcacc
aattctgaatacacagatgcaaagactgggaagacttgcttaatgaaagccctgatgaat
ttgaaaaatggaaggaatgacacaatccctcttttgctggaaatagatcagaagacacag
aatcccaggccgcttgtcaacgtggcatgctctgactgttactacagaggccagactgca
ctccatattgccatagagagaaggagcctggacatagtgaaagttctagtggagaatgga
gctgacgtccatgccagagctcatggtgaattcttcaggaagaagaacgagggagtttgc
ttttattttggtgaacttcccctctctttggctgcctgtaccaaccagtttgaggttgta
gaatatcttctaaacaacccccaccaaaaagccagactccaggagcaagatacacaggga
aacacagtcctccatgccctggtgatgattgcagatgacactgaggagaacaccaagttt
gtgagcacagtatatgttgaaatcctgaaggcaggtgtgaagactgacccaacagtgaaa
ctggaggagattgtgaattatgacggattaaatcccttgcaacttgctgccaagacaggc
aaagtggagatcttcaaacacatcatccaaagagagatcaaagacccagtgtacaggcac
ctgtcccgcaagttcaccgaatggacctatggacctatccacgtctccctctatgacttg
tcttctctagacagctttgaggaaaactctgtgctggagattctggcatacagcagtgac
acaccaaatcggtacaaaatggtggttttggagccactgaacaaattgcttcagcagaag
tgggaaacatttgcttccaagagattctacttcagttttatctcatacttgtcattcatg
atcatctttacagccattgcctactatcagcccttaagggtaaagccttcatttccagtg
gagttcacagctggaggcttcctgtgggtctctggcctgatcattattttgcttggaggt
gtatacctaatttttgctcagagtctgtatctgcggaggagacgccagtccctgaagact
atgtgttctgacagctgtgttgagatcttgatcttcatccaggctttctcattgctgttg
tcagcagtcctgtatggcgcaagttcagaaaactatgtggcagtgatggtgttctccctg
cttctgggatgggtgaacatgctgtattacactcggggctttcagcgcatcggcatttac
agtgtcatgatacagaagactatcctgagagatctgttgcgtttcctcttggtttatatt
atcttcctctttggctttgctgcagctctggttacgctgatgggggacgctccttcactc
tctcagaacaagtctgttgctcagatggagagtgctgggagccatgctatgtatggtggg
ctgctcagtgtctccctggagctcttcaagatcaccattgggatgggtgacctggatttt
cacgaacatgccagattcagatactttgtcatgcttctgctgctgctttttgtgatcctc
acttacatcctattgctcaacatgctgattgcactcatgagtgagactgtcactgatatt
tctggttacagcaaaagtgtttggaagctgcagagggctattgctatcctagaaatagag
aaggcctggctgtggcgccaaggaggaaagaggagatctggctgcttgatgtcagtgggc
ctcaataaaaaagatgagaggtggtgcttcagagtagaggaaataaaatggacaagttgg
gcaaaggaagtgggagttctcaagcaagagcctggaaacaccaatgatttggaaataaat
ccggaagagacgaggtcacggaaacaggtgccacagaaacaactgagatcagctgtttca
gaggagcagtcactgctgcagccccagctatcagcaactgagatgatgcctctaaaggga
caaaccagaaatctttag
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